Detailed information NTG0228739

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B9N48_RS02120
• Genome accession: NZ_CP021169
• Coordinates: 418873..420021 (+)
• Length: 382 a.a.
• NCBI ID: WP_086343455.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TLO3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 413873..425021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9N48_RS02100	yclH	414249..414929 (-)	681	WP_015382762.1	ABC transporter ATP-binding protein	-
B9N48_RS02105	yclI	414945..416405 (-)	1461	WP_015382763.1	ABC transporter permease	-
B9N48_RS02110	yclJ	416618..417301 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
B9N48_RS02115	yclK	417288..418709 (+)	1422	WP_086343454.1	two-component system sensor histidine kinase YclK	-
B9N48_RS02120	rapC	418873..420021 (+)	1149	WP_086343455.1	response regulator aspartate phosphatase RapC	Regulator
B9N48_RS02125	phrC	420005..420127 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
B9N48_RS02130	yczM	420225..420314 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
B9N48_RS02135	yczN	420396..420509 (-)	114	WP_014478831.1	YjcZ family sporulation protein	-
B9N48_RS02140	thrD	420662..422026 (-)	1365	WP_086343456.1	aspartate kinase	-
B9N48_RS02145	ceuB	422411..423361 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
B9N48_RS02150	yclO	423354..424301 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45605.64 Da
• Isoelectric Point: 5.0364

>NTDB_id=228739 B9N48_RS02120 WP_086343455.1 418873..420021(+) (rapC) [Bacillus subtilis strain TLO3]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=228739 B9N48_RS02120 WP_086343455.1 418873..420021(+) (rapC) [Bacillus subtilis strain TLO3]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCATCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.215	100	0.992
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568