Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AM457_RS05565 Genome accession   NZ_CP026761
Coordinates   1187082..1187717 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain AR_0078     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1182082..1192717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AM457_RS05550 (AM457_05550) - 1182870..1184054 (+) 1185 WP_000939102.1 S41 family peptidase -
  AM457_RS05555 (AM457_05555) - 1184058..1185479 (-) 1422 WP_000840554.1 sigma-54-dependent transcriptional regulator -
  AM457_RS05560 (AM457_05560) pilS 1185503..1187071 (-) 1569 WP_001160345.1 sensor histidine kinase Regulator
  AM457_RS05565 (AM457_05565) letA 1187082..1187717 (-) 636 WP_000633799.1 response regulator Regulator
  AM457_RS05570 (AM457_05570) pbpG 1187930..1188976 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AM457_RS05575 (AM457_05575) thrC 1189086..1190225 (-) 1140 WP_000063591.1 threonine synthase -
  AM457_RS05580 (AM457_05580) - 1190281..1191582 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  AM457_RS05585 (AM457_05585) - 1191827..1192642 (-) 816 WP_000011164.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=228633 AM457_RS05565 WP_000633799.1 1187082..1187717(-) (letA) [Acinetobacter baumannii strain AR_0078]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=228633 AM457_RS05565 WP_000633799.1 1187082..1187717(-) (letA) [Acinetobacter baumannii strain AR_0078]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCCTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55