Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/comEC   Type   Machinery gene
Locus tag   MTAI_RS13785 Genome accession   NZ_CP021130
Coordinates   2795884..2797923 (+) Length   679 a.a.
NCBI ID   WP_027888179.1    Uniprot ID   A0A399DVA1
Organism   Meiothermus taiwanensis WR-220     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2790884..2802923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTAI_RS13760 (Mtai_v1c27150) - 2790907..2792511 (-) 1605 WP_027888174.1 acyl-CoA dehydrogenase family protein -
  MTAI_RS13765 (Mtai_v1c27160) - 2792545..2793564 (+) 1020 WP_027888175.1 threonine aldolase family protein -
  MTAI_RS13770 (Mtai_v1c27170) - 2793572..2793766 (-) 195 WP_027888176.1 hypothetical protein -
  MTAI_RS13775 (Mtai_v1c27180) - 2793819..2794499 (-) 681 WP_027888177.1 glycerophosphodiester phosphodiesterase -
  MTAI_RS13780 (Mtai_v1c27200) - 2795537..2795887 (+) 351 WP_027888178.1 helix-hairpin-helix domain-containing protein -
  MTAI_RS13785 (Mtai_v1c27210) comA/comEC 2795884..2797923 (+) 2040 WP_027888179.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MTAI_RS13790 (Mtai_v1c27220) - 2797925..2798743 (-) 819 WP_027888180.1 ParB/RepB/Spo0J family partition protein -
  MTAI_RS13795 (Mtai_v1c27230) - 2798727..2799491 (-) 765 WP_027888181.1 ParA family protein -
  MTAI_RS13800 (Mtai_v1c27240) rsmG 2799485..2800213 (-) 729 WP_027888182.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  MTAI_RS13805 (Mtai_v1c27250) mnmG 2800273..2802084 (-) 1812 WP_027888183.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 74216.28 Da        Isoelectric Point: 10.0866

>NTDB_id=228457 MTAI_RS13785 WP_027888179.1 2795884..2797923(+) (comA/comEC) [Meiothermus taiwanensis WR-220]
MIPFALGAGALLGALSQLTPWAFLGLLAGLGLPQSARWLGLGAYALIILHLGLAKDPWDSQIGRWVRIEGTLRGGFLYTP
QGRLYVHHFPNLQDGRYVLEGHLLRPLSKRNPGGFDQQTWLHSLGVTAVLRAQQVVHYEPLPPDPRQWLQKQLVAGLSPP
VAALLAALTLGERRNLGEAYTEFQQAGLAHTLALSGLHVAILTGFFVLLLHPLGRWRYPAALLLLLLYLWLVGPQPSLVR
AVIMAGFVLTGLFIGRGRVAVLPALSLALFVQLLLEPRTLFSLSAQLSYLAVLGMALVLPRLPRLEGWKQWVWSSVSVTL
AAQILILPLLLHHFHQLPLVSPIANLLVLPLLSFLVPLGFLKLLVGGLLAGPIEILGSLVLGLVGWLSNGPLLRWGEIPP
VGFALYYLGLLPLLLALYGRLHWEHAAGLAATAALASILPQHLPRAELWQLDVGQGDATLVRLPGRVEILVDGGRDWAYP
RLEQALRALGVDDLDLLIATHPDGDHVGAQLKVIRNFPVGALVTGPRVRGATLDDALHLAARQRGVPVFFARRGSQLTLA
GARLRFLGPQGDEVEDNERSLVFVLEYRSHKILFTGDAPVSVEVRWPTERVDILKVGHHGSESSTGDYLLQHFRPKLALI
GVGNNPYGHPSRVVLERLNQYGVQIRRTDIEGAIRIPLP

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=228457 MTAI_RS13785 WP_027888179.1 2795884..2797923(+) (comA/comEC) [Meiothermus taiwanensis WR-220]
ATGATTCCTTTTGCTCTGGGTGCTGGGGCCCTGCTGGGAGCCCTCAGCCAGCTAACCCCCTGGGCCTTCCTAGGCTTGCT
GGCAGGGCTTGGACTCCCGCAATCCGCACGTTGGCTTGGTTTGGGTGCCTACGCCTTGATCATCCTGCACCTAGGCCTAG
CCAAGGATCCTTGGGATTCGCAAATAGGCCGGTGGGTGCGGATCGAAGGCACCCTTCGAGGGGGTTTTCTATACACACCG
CAAGGACGCCTGTACGTACACCACTTTCCAAATCTGCAGGATGGCCGCTACGTTTTGGAGGGCCATCTGCTGCGCCCTTT
AAGTAAGCGCAACCCCGGGGGCTTTGATCAACAAACCTGGTTGCACAGCCTGGGGGTTACAGCAGTGCTGCGAGCCCAGC
AGGTTGTGCATTACGAACCCCTGCCCCCAGATCCCCGCCAGTGGCTTCAAAAGCAGCTTGTAGCGGGCCTCTCCCCTCCA
GTAGCCGCCCTGCTCGCCGCCCTGACCCTCGGTGAACGTCGCAATCTAGGTGAAGCCTATACGGAGTTTCAGCAAGCCGG
GCTGGCCCACACCCTGGCCCTATCTGGCTTACATGTGGCGATCCTAACCGGCTTTTTTGTACTCTTGCTCCATCCGCTGG
GCAGGTGGCGCTACCCTGCAGCCTTGCTTTTATTGCTGCTGTATCTGTGGCTTGTTGGGCCCCAGCCCTCGCTGGTACGA
GCAGTGATTATGGCGGGCTTTGTGTTGACGGGGCTCTTCATTGGACGTGGCCGGGTAGCAGTCTTGCCGGCTTTGTCGCT
AGCTTTATTTGTTCAATTGCTGCTCGAGCCGCGTACCTTGTTCAGTCTTTCGGCGCAGCTCTCCTATCTGGCCGTGCTGG
GCATGGCCCTGGTACTACCACGCCTGCCCAGGCTCGAGGGCTGGAAACAGTGGGTCTGGTCATCGGTGAGCGTCACCCTT
GCTGCACAAATTCTGATCCTTCCCCTCTTGCTACATCATTTCCATCAACTGCCCCTGGTCTCCCCCATTGCCAACTTGCT
GGTGTTACCCTTGCTGAGCTTCCTGGTTCCCCTGGGCTTTCTCAAACTACTAGTGGGCGGCCTGCTGGCCGGGCCCATCG
AGATTCTTGGTTCCTTGGTTCTGGGGCTGGTTGGGTGGCTGTCAAATGGCCCTTTGTTGCGCTGGGGTGAGATACCGCCC
GTGGGGTTCGCTCTCTACTACCTCGGCCTCCTCCCACTCCTGCTGGCCCTTTACGGCCGTCTTCACTGGGAACATGCGGC
AGGGCTTGCTGCCACGGCGGCCCTGGCCTCCATCCTGCCGCAGCACCTACCCCGGGCCGAACTGTGGCAGCTCGACGTCG
GCCAGGGCGATGCCACCCTGGTGCGCCTTCCCGGCAGGGTAGAAATCCTGGTGGACGGAGGGCGTGACTGGGCTTACCCC
CGGCTAGAACAAGCCTTGCGGGCCTTGGGTGTGGATGATCTTGACCTGCTCATCGCCACCCACCCCGATGGAGACCATGT
GGGGGCCCAGTTAAAGGTTATACGGAATTTTCCAGTTGGTGCATTGGTTACTGGGCCCAGGGTGCGGGGCGCCACCTTGG
ACGATGCCCTGCACCTGGCCGCCCGTCAGCGTGGAGTCCCGGTTTTTTTTGCACGCAGAGGAAGCCAGCTAACCCTGGCC
GGGGCCCGCCTTCGTTTCTTGGGGCCACAAGGTGACGAGGTCGAGGACAACGAACGCAGTTTGGTTTTTGTGTTGGAGTA
CAGGAGTCACAAGATACTTTTTACCGGCGACGCCCCCGTCTCCGTCGAGGTGCGCTGGCCTACCGAGAGGGTGGATATCC
TAAAGGTGGGTCATCATGGCTCTGAGAGCAGCACCGGTGATTATCTATTGCAGCACTTCCGCCCCAAGCTAGCCTTAATT
GGTGTGGGCAATAACCCGTATGGCCACCCGTCGAGGGTCGTACTAGAGCGTCTAAATCAGTACGGTGTGCAAATTCGACG
TACCGATATCGAGGGGGCTATACGAATTCCGTTGCCTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(452-636)

Competence protein (Competence)

(168-417)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A399DVA1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Thermus thermophilus HB27

49.703

99.264

0.493
  comEC Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

41.239

97.496

0.402

Multiple sequence alignment