Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C4J65_RS13995 Genome accession   NZ_CP026730
Coordinates   3080755..3081879 (+) Length   374 a.a.
NCBI ID   WP_003975482.1    Uniprot ID   Q9X8L6
Organism   Streptomyces sp. CB09001     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3075755..3086879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J65_RS13980 (C4J65_13965) - 3076002..3076826 (+) 825 WP_115742720.1 hypothetical protein -
  C4J65_RS13985 (C4J65_13970) - 3077005..3078771 (-) 1767 WP_115742721.1 sigma-70 family RNA polymerase sigma factor -
  C4J65_RS13990 (C4J65_13975) radA/sms 3079264..3080673 (+) 1410 WP_115742722.1 DNA repair protein RadA Machinery gene
  C4J65_RS13995 (C4J65_13980) disA 3080755..3081879 (+) 1125 WP_003975482.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C4J65_RS36055 - 3081916..3082758 (-) 843 WP_162833182.1 hypothetical protein -
  C4J65_RS14010 (C4J65_13995) - 3082945..3083871 (+) 927 WP_115742725.1 A/G-specific adenine glycosylase -
  C4J65_RS14015 (C4J65_14000) - 3084161..3084694 (+) 534 WP_003975479.1 SigE family RNA polymerase sigma factor -
  C4J65_RS14020 (C4J65_14005) - 3084682..3085359 (+) 678 WP_205351008.1 hypothetical protein -
  C4J65_RS14025 (C4J65_14010) cseB 3085491..3086195 (+) 705 WP_115742727.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40043.76 Da        Isoelectric Point: 5.0058

>NTDB_id=228396 C4J65_RS13995 WP_003975482.1 3080755..3081879(+) (disA) [Streptomyces sp. CB09001]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=228396 C4J65_RS13995 WP_003975482.1 3080755..3081879(+) (disA) [Streptomyces sp. CB09001]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACCTCCCTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGTCTGATCGTGC
TGGGTTCCGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCGTGCTGGATGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGGGTGCAGCTCCTTCC
GGATCCGACCATTCCGACGGAGGAGACCGGTACGCGGCACCGTACTGCCGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGTTGTACGTGGACGGGCAGCGGCGGGTGCTGGAGGATTCGGCCGCG
ATTCTGTCGCGGGCCAATCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGGACGCTGTC
GGCGTTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCGGCGGTCGCGCAGCGGCTCGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGGACCGACGGGCGGCTGCTGGCGCTGCAGCTGGACGAGTTGATCGCC
GGTGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCGACCGCGAAGCGCTCGCGGACGGTCGACGA
GGCGCTCGCCGAGCTGGACAAGCTCAGCCATGCCGAGCTGCTGGAGCTGTCCACGGTGGCACGGGCGTTGGGGTACACCG
GGTCGCCCGAGACACTGGACTCCGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGTGTCGACGACCTCCAGACGGTGGA
CGGCGTCGGTGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9X8L6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447


Multiple sequence alignment