Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | CAH07_RS08870 | Genome accession | NZ_CP021123 |
| Coordinates | 1682997..1684034 (+) | Length | 345 a.a. |
| NCBI ID | WP_101172386.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1677997..1689034
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS08845 (CAH07_08730) | rsbRD | 1678215..1679051 (+) | 837 | WP_101172385.1 | RsbT co-antagonist protein RsbRD | - |
| CAH07_RS08850 (CAH07_08735) | yqhB | 1679104..1680432 (-) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| CAH07_RS08855 (CAH07_08740) | corA | 1680575..1681528 (+) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| CAH07_RS08865 (CAH07_08750) | comGA | 1681940..1683010 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| CAH07_RS08870 (CAH07_08755) | comGB | 1682997..1684034 (+) | 1038 | WP_101172386.1 | comG operon protein ComGB | Machinery gene |
| CAH07_RS08875 (CAH07_08760) | comGC | 1684048..1684344 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| CAH07_RS08880 (CAH07_08765) | comGD | 1684334..1684765 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| CAH07_RS08885 (CAH07_08770) | comGE | 1684749..1685096 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| CAH07_RS08890 (CAH07_08775) | comGF | 1685122..1685505 (+) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| CAH07_RS08895 (CAH07_08780) | comGG | 1685506..1685880 (+) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| CAH07_RS08900 (CAH07_08785) | spoIITA | 1685951..1686130 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| CAH07_RS08905 (CAH07_08790) | yqzG | 1686172..1686498 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| CAH07_RS08910 (CAH07_08795) | tapA | 1686770..1687531 (+) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CAH07_RS08915 (CAH07_08800) | sipW | 1687515..1688087 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| CAH07_RS08920 (CAH07_08805) | tasA | 1688151..1688936 (+) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39646.10 Da Isoelectric Point: 9.7153
>NTDB_id=228387 CAH07_RS08870 WP_101172386.1 1682997..1684034(+) (comGB) [Bacillus subtilis strain SEM-9]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=228387 CAH07_RS08870 WP_101172386.1 1682997..1684034(+) (comGB) [Bacillus subtilis strain SEM-9]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |