Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SPYM3_RS07815 Genome accession   NC_004070
Coordinates   1495397..1496431 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes MGAS315     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490397..1501431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM3_RS07780 (SpyM3_1496) - 1491173..1491475 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  SPYM3_RS07785 (SpyM3_1497) rnpM 1491468..1491764 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  SPYM3_RS07790 (SpyM3_1498) nusA 1491780..1492937 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  SPYM3_RS07795 (SpyM3_1499) rimP 1493112..1493648 (-) 537 WP_011054929.1 ribosome maturation factor RimP -
  SPYM3_RS07805 (SpyM3_1500) trmB 1493907..1494542 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYM3_RS07810 (SpyM3_1501) ccrZ 1494542..1495333 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPYM3_RS07815 (SpyM3_1502) pptB 1495397..1496431 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  SPYM3_RS07820 (SpyM3_1503) pptA 1496434..1497159 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYM3_RS07825 (SpyM3_1504) - 1497231..1497650 (+) 420 WP_002983376.1 HIT family protein -
  SPYM3_RS07830 (SpyM3_1505) - 1497647..1498003 (+) 357 WP_002988657.1 hypothetical protein -
  SPYM3_RS07835 (SpyM3_1506) brpA 1498114..1499397 (-) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPYM3_RS07840 (SpyM3_1507) - 1499406..1499930 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPYM3_RS07845 (SpyM3_1508) tsaE 1499905..1500366 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=22813 SPYM3_RS07815 WP_010922583.1 1495397..1496431(-) (pptB) [Streptococcus pyogenes MGAS315]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=22813 SPYM3_RS07815 WP_010922583.1 1495397..1496431(-) (pptB) [Streptococcus pyogenes MGAS315]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment