Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   BL14DL4_RS12935 Genome accession   NZ_CP026673
Coordinates   2435431..2436279 (-) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain 14ADL4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2430431..2441279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL14DL4_RS12895 (BL14DL4_02578) rpsR 2430636..2430875 (-) 240 WP_003178022.1 30S ribosomal protein S18 -
  BL14DL4_RS12900 (BL14DL4_02579) ssbA 2430927..2431439 (-) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  BL14DL4_RS12905 (BL14DL4_02580) rpsF 2431486..2431773 (-) 288 WP_003178026.1 30S ribosomal protein S6 -
  BL14DL4_RS12910 (BL14DL4_02581) ychF 2431887..2432987 (-) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  BL14DL4_RS12920 (BL14DL4_02582) - 2433166..2433372 (-) 207 WP_011201785.1 DUF951 domain-containing protein -
  BL14DL4_RS12925 (BL14DL4_02583) - 2433460..2434473 (-) 1014 WP_003178030.1 hypothetical protein -
  BL14DL4_RS12930 (BL14DL4_02584) yyaC 2434777..2435394 (+) 618 WP_003178032.1 spore protease YyaC -
  BL14DL4_RS12935 (BL14DL4_02585) spo0J 2435431..2436279 (-) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  BL14DL4_RS12940 (BL14DL4_02586) soj 2436272..2437033 (-) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  BL14DL4_RS12945 (BL14DL4_02587) - 2437276..2437719 (-) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  BL14DL4_RS12950 (BL14DL4_02588) - 2437786..2438643 (-) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  BL14DL4_RS12955 (BL14DL4_02589) noc 2438699..2439550 (-) 852 WP_003178042.1 nucleoid occlusion protein -
  BL14DL4_RS12960 (BL14DL4_02590) rsmG 2439648..2440367 (-) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=227960 BL14DL4_RS12935 WP_003178034.1 2435431..2436279(-) (spo0J) [Bacillus licheniformis strain 14ADL4]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=227960 BL14DL4_RS12935 WP_003178034.1 2435431..2436279(-) (spo0J) [Bacillus licheniformis strain 14ADL4]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401


Multiple sequence alignment