Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   B6257_RS11735 Genome accession   NZ_CP021011
Coordinates   2257357..2257755 (-) Length   132 a.a.
NCBI ID   WP_101562687.1    Uniprot ID   -
Organism   Bacillus velezensis strain GFP-2     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2252357..2262755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6257_RS20145 - 2253372..2253500 (-) 129 Protein_2251 hypothetical protein -
  B6257_RS11705 (B6257_11640) - 2253645..2254847 (+) 1203 WP_071392147.1 GTP-binding protein -
  B6257_RS11710 (B6257_11645) - 2254912..2256048 (+) 1137 WP_071392146.1 zinc-dependent alcohol dehydrogenase -
  B6257_RS11715 (B6257_11650) - 2256063..2256497 (+) 435 WP_021494203.1 RDD family protein -
  B6257_RS11720 (B6257_11655) - 2256614..2256889 (+) 276 WP_373369498.1 YckD family protein -
  B6257_RS19870 - 2256993..2257184 (+) 192 WP_071392145.1 family 1 glycosylhydrolase -
  B6257_RS11730 (B6257_11665) - 2257109..2257338 (+) 230 Protein_2257 family 1 glycosylhydrolase -
  B6257_RS11735 (B6257_11670) nin/comJ 2257357..2257755 (-) 399 WP_101562687.1 competence protein ComJ Regulator
  B6257_RS11740 (B6257_11675) nucA/comI 2257778..2258215 (-) 438 WP_071392144.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  B6257_RS11745 (B6257_11680) hxlB 2258576..2259133 (-) 558 WP_071392143.1 6-phospho-3-hexuloisomerase -
  B6257_RS11750 (B6257_11685) hxlA 2259130..2259765 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  B6257_RS11755 (B6257_11690) - 2259997..2260359 (+) 363 WP_016936795.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15037.04 Da        Isoelectric Point: 4.9712

>NTDB_id=227820 B6257_RS11735 WP_101562687.1 2257357..2257755(-) (nin/comJ) [Bacillus velezensis strain GFP-2]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISHLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=227820 B6257_RS11735 WP_101562687.1 2257357..2257755(-) (nin/comJ) [Bacillus velezensis strain GFP-2]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGGTACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCCATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.969

97.727

0.742

Multiple sequence alignment