Detailed information NTG0227788

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: B6257_RS03100
• Genome accession: NZ_CP021011
• Coordinates: 591294..593672 (-)
• Length: 792 a.a.
• NCBI ID: WP_071391562.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GFP-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 586294..598672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6257_RS03065 (B6257_03050)	-	587366..588094 (+)	729	WP_014305489.1	amino acid ABC transporter ATP-binding protein	-
B6257_RS03070 (B6257_03055)	-	588115..588942 (+)	828	WP_101562306.1	transporter substrate-binding domain-containing protein	-
B6257_RS03075 (B6257_03060)	-	588999..589649 (+)	651	WP_069473522.1	amino acid ABC transporter permease	-
B6257_RS03080 (B6257_03065)	-	589668..590324 (+)	657	WP_024085646.1	amino acid ABC transporter permease	-
B6257_RS03085 (B6257_03070)	-	590360..590491 (-)	132	WP_003152741.1	YrzQ family protein	-
B6257_RS03090 (B6257_03075)	-	590513..590704 (-)	192	WP_003152738.1	hypothetical protein	-
B6257_RS03095 (B6257_03080)	-	590717..591175 (-)	459	WP_017418223.1	PRC-barrel domain-containing protein	-
B6257_RS03100 (B6257_03085)	recD2	591294..593672 (-)	2379	WP_071391562.1	ATP-dependent RecD-like DNA helicase	Machinery gene
B6257_RS03105 (B6257_03090)	-	593691..594311 (-)	621	WP_088005508.1	tetratricopeptide repeat protein	-
B6257_RS03110 (B6257_03095)	mnmA	594399..595514 (-)	1116	WP_058906210.1	tRNA 2-thiouridine(34) synthase MnmA	-
B6257_RS03115 (B6257_03100)	-	595551..596690 (-)	1140	WP_058906211.1	cysteine desulfurase family protein	-
B6257_RS03120 (B6257_03105)	cymR	596709..597125 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
B6257_RS03125 (B6257_03110)	-	597320..598588 (+)	1269	WP_071391559.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88378.06 Da
• Isoelectric Point: 4.9490

>NTDB_id=227788 B6257_RS03100 WP_071391562.1 591294..593672(-) (recD2) [Bacillus velezensis strain GFP-2]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIIVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=227788 B6257_RS03100 WP_071391562.1 591294..593672(-) (recD2) [Bacillus velezensis strain GFP-2]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGACGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGTCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGATGTGGAAGGCATCGGCTTTGTGAAAGCCGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAGATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCGTCATTGTTTTACGCCGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAACGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCCTCGCCGATGCTTTTACTGACCGGGGGACCTGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGCGTATCGCTTGACCCCGGTGATTATAAAAAAGACGAAGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTTGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTCCCTAAGCACATTCAGCTCATTATAGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGACAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTACGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGACTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGACCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAAGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATCCATAAGTCGCAGGGAAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATATG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.001	99.874	0.889