Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   B4U37_RS06990 Genome accession   NZ_CP020880
Coordinates   1345059..1345247 (+) Length   62 a.a.
NCBI ID   WP_088017645.1    Uniprot ID   A0A1Y0CKG1
Organism   Sutcliffiella horikoshii strain 20a     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1340059..1350247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4U37_RS06970 (B4U37_06960) - 1341767..1341949 (-) 183 WP_010192034.1 YjzD family protein -
  B4U37_RS21910 - 1342064..1342201 (+) 138 WP_157663733.1 hypothetical protein -
  B4U37_RS06975 (B4U37_06965) - 1342349..1343086 (+) 738 WP_088017642.1 hypothetical protein -
  B4U37_RS06980 (B4U37_06970) - 1343178..1343948 (+) 771 WP_088017643.1 NAD(P)-dependent oxidoreductase -
  B4U37_RS06985 (B4U37_06975) med 1344090..1345043 (+) 954 WP_088017644.1 BMP family ABC transporter substrate-binding protein Regulator
  B4U37_RS06990 (B4U37_06980) comZ 1345059..1345247 (+) 189 WP_088017645.1 ComZ family protein Regulator
  B4U37_RS06995 (B4U37_06985) - 1345308..1345550 (-) 243 WP_088017646.1 hypothetical protein -
  B4U37_RS07000 (B4U37_06990) - 1345759..1346691 (+) 933 WP_088017647.1 beta-ketoacyl-ACP synthase III -
  B4U37_RS07005 (B4U37_06995) fabF 1346740..1347978 (+) 1239 WP_088020199.1 beta-ketoacyl-ACP synthase II -
  B4U37_RS07015 (B4U37_07005) - 1348513..1349295 (+) 783 WP_088017649.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7184.31 Da        Isoelectric Point: 4.0700

>NTDB_id=226831 B4U37_RS06990 WP_088017645.1 1345059..1345247(+) (comZ) [Sutcliffiella horikoshii strain 20a]
MEQDRTMQYMAIAMKYLPEAKQMLDETGLELEPQHIQPLVSLLTKVMDEAYELGKQNALDLE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=226831 B4U37_RS06990 WP_088017645.1 1345059..1345247(+) (comZ) [Sutcliffiella horikoshii strain 20a]
ATGGAACAAGATAGAACGATGCAATATATGGCCATAGCCATGAAATATTTACCAGAAGCAAAACAAATGCTTGATGAAAC
AGGATTAGAGTTAGAGCCTCAACATATTCAACCACTTGTCTCGTTACTGACAAAAGTGATGGATGAAGCATATGAGCTCG
GAAAACAAAATGCGTTAGATTTAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0CKG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

51.724

93.548

0.484

Multiple sequence alignment