Detailed information NTG0226800

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: B9C53_RS17380
• Genome accession: NZ_CP020874
• Coordinates: 3549988..3552339 (+)
• Length: 783 a.a.
• NCBI ID: WP_038459264.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GYL4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3544988..3557339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9C53_RS17340 (B9C53_17285)	yhbY	3545259..3545549 (+)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
B9C53_RS17345 (B9C53_17290)	-	3545560..3546129 (+)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
B9C53_RS17350 (B9C53_17295)	yqeK	3546119..3546694 (+)	576	WP_032873949.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
B9C53_RS17355 (B9C53_17300)	rsfS	3546698..3547054 (+)	357	WP_007408260.1	ribosome silencing factor	-
B9C53_RS17360 (B9C53_17305)	-	3547051..3547788 (+)	738	WP_038459270.1	class I SAM-dependent DNA methyltransferase	-
B9C53_RS17365 (B9C53_17310)	comER	3547857..3548678 (-)	822	WP_012118027.1	late competence protein ComER	-
B9C53_RS17370 (B9C53_17315)	comEA	3548737..3549351 (+)	615	WP_038459268.1	helix-hairpin-helix domain-containing protein	Machinery gene
B9C53_RS17375 (B9C53_17320)	-	3549418..3549987 (+)	570	WP_038459266.1	ComE operon protein 2	-
B9C53_RS17380 (B9C53_17325)	comEC	3549988..3552339 (+)	2352	WP_038459264.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
B9C53_RS17385 (B9C53_17330)	-	3552358..3552492 (-)	135	WP_003152870.1	YqzM family protein	-
B9C53_RS19565	-	3552533..3552684 (+)	152	Protein_3340	hypothetical protein	-
B9C53_RS17390 (B9C53_17335)	holA	3552724..3553765 (+)	1042	Protein_3341	DNA polymerase III subunit delta	-
B9C53_RS17395 (B9C53_17340)	rpsT	3553782..3554048 (-)	267	WP_003152876.1	30S ribosomal protein S20	-
B9C53_RS17400 (B9C53_17345)	gpr	3554251..3555357 (+)	1107	WP_038459261.1	GPR endopeptidase	-
B9C53_RS17405 (B9C53_17350)	spoIIP	3555425..3556618 (+)	1194	WP_007612673.1	stage II sporulation protein P	-
B9C53_RS17410 (B9C53_17355)	-	3556635..3556973 (+)	339	WP_038459259.1	YqxA family protein	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86584.42 Da
• Isoelectric Point: 9.0950

>NTDB_id=226800 B9C53_RS17380 WP_038459264.1 3549988..3552339(+) (comEC) [Bacillus velezensis strain GYL4]
MKYKYLLLPLAAVSATAGIAAAHVSWVLLLFLLYLLFIIVKTKQYAPVIVCLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKISAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFDYKEYLYSQQI
HWLFSVTSIQQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFVSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTGEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=226800 B9C53_RS17380 WP_038459264.1 3549988..3552339(+) (comEC) [Bacillus velezensis strain GYL4]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTCCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCAGTATGCTCCGGTTATCGTCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAAGTTGACGGAGCGAAAATATCAGCTGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCACTTGAGGAAAAGAGACTTATTGAACAGCTCGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACGTCCATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTAGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAAGCGGGAATTTTGCTGCTGCT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTCGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTGTTTCCC
TTCTTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACTGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAAGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAAGATCAGAACATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCTACGGGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.865	98.595	0.561