Detailed information NTG0226018

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BkAM31D_RS16090
• Genome accession: NZ_CP020814
• Coordinates: 3180686..3181645 (-)
• Length: 319 a.a.
• NCBI ID: WP_066152858.1
• Uniprot ID: A0A1X9MDK9
• Organism: Halalkalibacter krulwichiae strain AM31D
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3175686..3186645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BkAM31D_RS16060 (BkAM31D_17505)	-	3176150..3177163 (+)	1014	WP_066152841.1	LCP family protein	-
BkAM31D_RS16065 (BkAM31D_17510)	fabF	3177208..3178449 (-)	1242	WP_066152844.1	beta-ketoacyl-ACP synthase II	-
BkAM31D_RS16070 (BkAM31D_17515)	-	3178488..3179426 (-)	939	WP_066152847.1	beta-ketoacyl-ACP synthase III	-
BkAM31D_RS16075 (BkAM31D_17520)	-	3179626..3179946 (+)	321	WP_066152850.1	hypothetical protein	-
BkAM31D_RS16080 (BkAM31D_17525)	-	3179973..3180293 (-)	321	WP_066152853.1	hypothetical protein	-
BkAM31D_RS16085 (BkAM31D_17530)	comZ	3180412..3180606 (-)	195	WP_066152855.1	ComZ family protein	Regulator
BkAM31D_RS16090 (BkAM31D_17535)	med	3180686..3181645 (-)	960	WP_066152858.1	BMP family ABC transporter substrate-binding protein	Regulator
BkAM31D_RS16095 (BkAM31D_17540)	-	3181929..3183524 (+)	1596	WP_066152861.1	peptide chain release factor 3	-
BkAM31D_RS23660 (BkAM31D_17545)	-	3183636..3183809 (-)	174	WP_157076786.1	hypothetical protein	-
BkAM31D_RS16100 (BkAM31D_17550)	-	3183824..3184717 (-)	894	WP_066152864.1	NAD(P)-dependent oxidoreductase	-
BkAM31D_RS16105 (BkAM31D_17555)	-	3184841..3185587 (-)	747	WP_066152867.1	hypothetical protein	-
BkAM31D_RS16110 (BkAM31D_17560)	-	3185829..3186020 (-)	192	WP_066152869.1	YjzC family protein	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 35479.58 Da
• Isoelectric Point: 4.0470

>NTDB_id=226018 BkAM31D_RS16090 WP_066152858.1 3180686..3181645(-) (med) [Halalkalibacter krulwichiae strain AM31D]
MFIQRILLLLVPVILLIGCASPNASNGNRVGLLLEDTIDDQGWNSKGYQGLLNIHSNLNVEVMFKEDMNTEPKVKNAIED
FVKEEVELVFGHGRYYADLFTEIAPLYPDVHFVSFNGEVEGDNVTSLHFDSYAMGYFAGMIAAAMSETGHIGAIATFPWQ
PEVQGFEAGAALYGRNDSSVHIEYVHDWFDSELASSYFEQLKSEGVDVFYPAGDGFHVSVIEEARNEGLYAIGYVGDQSD
LGESTVLTSTVQHVDYLYELIAEKYFNSELEKGNLRFDFDDGVITLGNFSSKVPEEFQIKIGNAVKSYIETGELPQEPI

Nucleotide

• Length: 960 bp

>NTDB_id=226018 BkAM31D_RS16090 WP_066152858.1 3180686..3181645(-) (med) [Halalkalibacter krulwichiae strain AM31D]
ATGTTTATTCAACGGATTTTATTGTTACTAGTGCCAGTAATACTATTAATAGGCTGTGCCAGTCCGAATGCTAGTAATGG
AAATAGAGTAGGATTATTACTCGAAGATACAATTGATGACCAGGGGTGGAATAGTAAAGGATATCAAGGGTTGCTAAACA
TTCATTCAAATTTAAATGTAGAAGTGATGTTTAAAGAAGATATGAACACAGAACCAAAAGTGAAAAATGCGATAGAAGAC
TTTGTCAAGGAAGAAGTAGAGCTTGTTTTTGGACATGGTCGTTATTACGCTGATTTATTTACAGAAATTGCACCTTTATA
TCCTGATGTTCATTTTGTCAGTTTTAACGGAGAAGTTGAAGGAGACAATGTCACAAGTCTTCATTTTGATAGTTATGCAA
TGGGTTATTTCGCAGGAATGATTGCCGCGGCAATGTCTGAAACAGGACATATTGGAGCAATTGCAACATTTCCATGGCAA
CCTGAAGTACAAGGTTTTGAAGCAGGTGCAGCACTATATGGAAGAAATGACTCCAGTGTCCACATTGAATATGTACATGA
CTGGTTTGACAGTGAACTTGCTTCTTCATATTTTGAGCAATTAAAAAGTGAAGGCGTCGATGTATTCTATCCCGCTGGTG
ATGGGTTTCATGTCAGTGTAATTGAAGAAGCTAGAAATGAAGGATTATATGCAATTGGTTATGTTGGTGATCAATCTGAT
TTAGGGGAATCAACGGTTCTAACGAGCACGGTCCAGCATGTCGATTATTTATATGAATTAATTGCCGAGAAATATTTTAA
TAGCGAACTAGAAAAAGGAAATTTGCGATTTGACTTTGATGACGGTGTGATTACGTTAGGAAACTTTAGTTCGAAAGTGC
CAGAGGAATTTCAGATAAAGATAGGAAATGCTGTAAAATCTTATATTGAAACAGGAGAGCTTCCACAAGAACCTATATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (29-316)

3D structure

• AlphaFold DB: A0A1X9MDK9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	48.734	99.06	0.483