Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BkAM31D_RS16085 Genome accession   NZ_CP020814
Coordinates   3180412..3180606 (-) Length   64 a.a.
NCBI ID   WP_066152855.1    Uniprot ID   A0A1X9MDH6
Organism   Halalkalibacter krulwichiae strain AM31D     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3175412..3185606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BkAM31D_RS16060 (BkAM31D_17505) - 3176150..3177163 (+) 1014 WP_066152841.1 LCP family protein -
  BkAM31D_RS16065 (BkAM31D_17510) fabF 3177208..3178449 (-) 1242 WP_066152844.1 beta-ketoacyl-ACP synthase II -
  BkAM31D_RS16070 (BkAM31D_17515) - 3178488..3179426 (-) 939 WP_066152847.1 beta-ketoacyl-ACP synthase III -
  BkAM31D_RS16075 (BkAM31D_17520) - 3179626..3179946 (+) 321 WP_066152850.1 hypothetical protein -
  BkAM31D_RS16080 (BkAM31D_17525) - 3179973..3180293 (-) 321 WP_066152853.1 hypothetical protein -
  BkAM31D_RS16085 (BkAM31D_17530) comZ 3180412..3180606 (-) 195 WP_066152855.1 ComZ family protein Regulator
  BkAM31D_RS16090 (BkAM31D_17535) med 3180686..3181645 (-) 960 WP_066152858.1 BMP family ABC transporter substrate-binding protein Regulator
  BkAM31D_RS16095 (BkAM31D_17540) - 3181929..3183524 (+) 1596 WP_066152861.1 peptide chain release factor 3 -
  BkAM31D_RS23660 (BkAM31D_17545) - 3183636..3183809 (-) 174 WP_157076786.1 hypothetical protein -
  BkAM31D_RS16100 (BkAM31D_17550) - 3183824..3184717 (-) 894 WP_066152864.1 NAD(P)-dependent oxidoreductase -
  BkAM31D_RS16105 (BkAM31D_17555) - 3184841..3185587 (-) 747 WP_066152867.1 hypothetical protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7395.70 Da        Isoelectric Point: 4.3765

>NTDB_id=226017 BkAM31D_RS16085 WP_066152855.1 3180412..3180606(-) (comZ) [Halalkalibacter krulwichiae strain AM31D]
MNNPEMNMKFMQIAMKHLPEGKKFLDAKGIELNMEDLQPMLELLLNVMDEAYELGKSEAVEQPK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=226017 BkAM31D_RS16085 WP_066152855.1 3180412..3180606(-) (comZ) [Halalkalibacter krulwichiae strain AM31D]
ATGAATAATCCTGAAATGAATATGAAATTTATGCAAATTGCAATGAAGCATCTTCCAGAAGGAAAGAAATTTCTAGATGC
AAAAGGGATAGAGCTTAATATGGAAGACCTTCAACCAATGCTTGAGCTCTTACTAAATGTAATGGATGAGGCTTACGAAC
TTGGAAAATCAGAAGCAGTAGAACAACCTAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X9MDH6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

85.938

0.5

Multiple sequence alignment