Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | B5P37_RS00050 | Genome accession | NZ_CP020773 |
| Coordinates | 4994..5968 (-) | Length | 324 a.a. |
| NCBI ID | WP_085235903.1 | Uniprot ID | A0AAC9RS60 |
| Organism | Staphylococcus lutrae strain ATCC 700373 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1..10968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5P37_RS00010 (B5P37_00010) | gcvT | 570..1661 (-) | 1092 | WP_085235889.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| B5P37_RS00015 (B5P37_00015) | - | 1820..2347 (-) | 528 | WP_085235891.1 | shikimate kinase | - |
| B5P37_RS00020 (B5P37_00020) | - | 2344..2532 (-) | 189 | WP_085235893.1 | hypothetical protein | - |
| B5P37_RS00025 (B5P37_00025) | - | 2510..2863 (-) | 354 | WP_244898617.1 | ComGF family competence protein | - |
| B5P37_RS00035 (B5P37_00035) | comGD | 3203..3646 (-) | 444 | WP_085235897.1 | competence type IV pilus minor pilin ComGD | - |
| B5P37_RS00040 (B5P37_00040) | comGC | 3624..3947 (-) | 324 | WP_085235899.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B5P37_RS00045 (B5P37_00045) | comGB | 3958..5025 (-) | 1068 | WP_085235901.1 | competence type IV pilus assembly protein ComGB | - |
| B5P37_RS00050 (B5P37_00050) | comGA | 4994..5968 (-) | 975 | WP_085235903.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B5P37_RS00055 (B5P37_00055) | - | 6036..6665 (-) | 630 | WP_085235905.1 | MBL fold metallo-hydrolase | - |
| B5P37_RS00060 (B5P37_00060) | - | 6678..6989 (-) | 312 | WP_085235908.1 | MTH1187 family thiamine-binding protein | - |
| B5P37_RS00065 (B5P37_00065) | - | 6990..7976 (-) | 987 | WP_085235910.1 | ROK family glucokinase | - |
| B5P37_RS00070 (B5P37_00070) | - | 7973..8176 (-) | 204 | WP_085235912.1 | YqgQ family protein | - |
| B5P37_RS00075 (B5P37_00075) | - | 8178..9617 (-) | 1440 | WP_085235914.1 | rhomboid family intramembrane serine protease | - |
| B5P37_RS00080 (B5P37_00080) | - | 9604..10173 (-) | 570 | WP_085235916.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37050.88 Da Isoelectric Point: 7.2050
>NTDB_id=225813 B5P37_RS00050 WP_085235903.1 4994..5968(-) (comGA) [Staphylococcus lutrae strain ATCC 700373]
MQLLLDHVLQFAIQNSASDIHFIPSSTQVEVRLRVKDHLMRYDTLNLETYQKLLSLLKYQAGLDISTRHKAQSGRYIYEY
KELYYLRVSTLPVNLGTESCVIRVTPQYFQNVRTHSVVDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVERLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSQIARDVIQASLSGHLVLSTIHANDCSGVLL
RLIEMGLTHQDLMQSINLIINQRLITTTSEQQQLVYETMNQEEIQFFLKHDFELPKAFITLADKLQLLYKEGVIDEKNLR
KYTI
MQLLLDHVLQFAIQNSASDIHFIPSSTQVEVRLRVKDHLMRYDTLNLETYQKLLSLLKYQAGLDISTRHKAQSGRYIYEY
KELYYLRVSTLPVNLGTESCVIRVTPQYFQNVRTHSVVDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVERLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSQIARDVIQASLSGHLVLSTIHANDCSGVLL
RLIEMGLTHQDLMQSINLIINQRLITTTSEQQQLVYETMNQEEIQFFLKHDFELPKAFITLADKLQLLYKEGVIDEKNLR
KYTI
Nucleotide
Download Length: 975 bp
>NTDB_id=225813 B5P37_RS00050 WP_085235903.1 4994..5968(-) (comGA) [Staphylococcus lutrae strain ATCC 700373]
ATGCAACTACTGCTCGATCATGTGTTACAATTTGCAATTCAAAATTCAGCATCGGACATTCATTTTATTCCTTCATCCAC
ACAAGTTGAAGTCAGACTCCGTGTTAAAGATCATTTAATGCGCTATGATACTTTAAATTTAGAAACGTATCAAAAACTAC
TTTCATTACTTAAATATCAAGCAGGTTTAGATATTTCAACAAGGCATAAGGCACAGAGTGGACGCTATATTTATGAATAT
AAAGAATTGTATTATTTAAGAGTTTCGACTTTGCCAGTGAATTTAGGGACTGAAAGTTGTGTCATACGAGTGACACCCCA
ATATTTTCAAAATGTTCGCACCCATAGTGTTGTAGATATCAAATCAAATATGGAGAAGAAGCAAGGTTTAATCCTTTTTA
GCGGTCCAACAGGAGCAGGAAAAAGTACTTTGATGTATCAAATGGTGGTTTATGCCAAACAAAAATTGAATTTAAATATT
ATTACGATTGAAGACCCGGTGGAACGTCTAGTTAATGGCATTACACAAATATCAGTGAACGAAAAAGCGGACATTACTTA
CGGTTCATCATTAAAAGCCATTTTACGCTGTGACCCGGATGTGATTCTTATAGGGGAAATTAGGGACAGTCAAATTGCAA
GAGATGTCATCCAAGCGAGCTTAAGCGGTCATTTAGTTTTATCAACCATCCATGCAAATGATTGCTCTGGGGTATTACTC
AGGCTCATAGAAATGGGACTCACACATCAAGATTTAATGCAATCCATTAATTTGATTATTAATCAAAGGTTGATTACTAC
GACTTCTGAGCAACAACAACTTGTTTATGAAACGATGAATCAAGAAGAAATCCAATTTTTCCTAAAACACGATTTTGAGC
TCCCGAAAGCATTTATAACACTTGCTGATAAACTTCAACTGCTATACAAAGAGGGGGTCATTGATGAAAAGAATTTACGA
AAATATACAATTTAG
ATGCAACTACTGCTCGATCATGTGTTACAATTTGCAATTCAAAATTCAGCATCGGACATTCATTTTATTCCTTCATCCAC
ACAAGTTGAAGTCAGACTCCGTGTTAAAGATCATTTAATGCGCTATGATACTTTAAATTTAGAAACGTATCAAAAACTAC
TTTCATTACTTAAATATCAAGCAGGTTTAGATATTTCAACAAGGCATAAGGCACAGAGTGGACGCTATATTTATGAATAT
AAAGAATTGTATTATTTAAGAGTTTCGACTTTGCCAGTGAATTTAGGGACTGAAAGTTGTGTCATACGAGTGACACCCCA
ATATTTTCAAAATGTTCGCACCCATAGTGTTGTAGATATCAAATCAAATATGGAGAAGAAGCAAGGTTTAATCCTTTTTA
GCGGTCCAACAGGAGCAGGAAAAAGTACTTTGATGTATCAAATGGTGGTTTATGCCAAACAAAAATTGAATTTAAATATT
ATTACGATTGAAGACCCGGTGGAACGTCTAGTTAATGGCATTACACAAATATCAGTGAACGAAAAAGCGGACATTACTTA
CGGTTCATCATTAAAAGCCATTTTACGCTGTGACCCGGATGTGATTCTTATAGGGGAAATTAGGGACAGTCAAATTGCAA
GAGATGTCATCCAAGCGAGCTTAAGCGGTCATTTAGTTTTATCAACCATCCATGCAAATGATTGCTCTGGGGTATTACTC
AGGCTCATAGAAATGGGACTCACACATCAAGATTTAATGCAATCCATTAATTTGATTATTAATCAAAGGTTGATTACTAC
GACTTCTGAGCAACAACAACTTGTTTATGAAACGATGAATCAAGAAGAAATCCAATTTTTCCTAAAACACGATTTTGAGC
TCCCGAAAGCATTTATAACACTTGCTGATAAACTTCAACTGCTATACAAAGAGGGGGTCATTGATGAAAAGAATTTACGA
AAATATACAATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
56.656 |
99.691 |
0.565 |
| comGA | Staphylococcus aureus N315 |
56.656 |
99.691 |
0.565 |