Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   B7473_RS03590 Genome accession   NZ_CP020713
Coordinates   691952..692638 (-) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain K17     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 686952..697638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7473_RS03570 (B7473_03575) rpsT 687866..688117 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  B7473_RS03575 (B7473_03580) holA 688162..689136 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  B7473_RS03580 (B7473_03585) comEC 689193..691394 (-) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  B7473_RS03585 (B7473_03590) - 691399..691860 (-) 462 WP_000439693.1 ComE operon protein 2 -
  B7473_RS03590 (B7473_03595) comEA 691952..692638 (-) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  B7473_RS03595 (B7473_03600) - 692678..693394 (-) 717 WP_000084822.1 class I SAM-dependent DNA methyltransferase -
  B7473_RS03600 (B7473_03605) rsfS 693397..693750 (-) 354 WP_001088020.1 ribosome silencing factor -
  B7473_RS03605 (B7473_03610) yqeK 693751..694335 (-) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  B7473_RS03610 (B7473_03615) nadD 694325..694894 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  B7473_RS03615 (B7473_03620) yhbY 694897..695187 (-) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  B7473_RS03620 (B7473_03625) aroE 695191..695997 (-) 807 WP_000666761.1 shikimate dehydrogenase -
  B7473_RS03625 (B7473_03630) yqeH 696011..697111 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=225451 B7473_RS03590 WP_072361794.1 691952..692638(-) (comEA) [Staphylococcus aureus strain K17]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=225451 B7473_RS03590 WP_072361794.1 691952..692638(-) (comEA) [Staphylococcus aureus strain K17]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974

Multiple sequence alignment