Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | B7W87_RS27895 | Genome accession | NZ_CP020704 |
| Coordinates | 5754217..5754774 (+) | Length | 185 a.a. |
| NCBI ID | WP_003110422.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain PASGNDM699 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5749217..5759774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7W87_RS27875 (B7W87_27875) | pilR | 5750493..5751830 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| B7W87_RS27880 (B7W87_27880) | thiO | 5751876..5752970 (-) | 1095 | WP_003134931.1 | glycine oxidase ThiO | - |
| B7W87_RS27885 (B7W87_27885) | - | 5753105..5753614 (+) | 510 | WP_003134932.1 | Tfp pilus assembly protein FimT/FimU | - |
| B7W87_RS27890 (B7W87_27890) | - | 5753720..5754226 (+) | 507 | WP_003134935.1 | Tfp pilus assembly protein FimT/FimU | - |
| B7W87_RS27895 (B7W87_27895) | pilV | 5754217..5754774 (+) | 558 | WP_003110422.1 | type 4a pilus minor pilin PilV | Machinery gene |
| B7W87_RS27900 (B7W87_27900) | pilW | 5754771..5755595 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| B7W87_RS27905 (B7W87_27905) | pilX | 5755592..5756179 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| B7W87_RS27910 (B7W87_27910) | pilY1 | 5756191..5759676 (+) | 3486 | WP_003134937.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20072.23 Da Isoelectric Point: 7.9204
>NTDB_id=225430 B7W87_RS27895 WP_003110422.1 5754217..5754774(+) (pilV) [Pseudomonas aeruginosa strain PASGNDM699]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=225430 B7W87_RS27895 WP_003110422.1 5754217..5754774(+) (pilV) [Pseudomonas aeruginosa strain PASGNDM699]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.378 |
100 |
0.984 |