Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   B7R57_RS00155 Genome accession   NZ_CP020656
Coordinates   32180..33166 (+) Length   328 a.a.
NCBI ID   WP_000959292.1    Uniprot ID   -
Organism   Staphylococcus aureus strain K5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 27180..38166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7R57_RS00130 (B7R57_00130) opp4B 27394..28356 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  B7R57_RS00135 (B7R57_00135) opp4C 28368..29248 (+) 881 Protein_26 oligopeptide ABC transporter permease -
  B7R57_RS00140 (B7R57_00140) trpS 29290..30279 (-) 990 WP_000448943.1 tryptophan--tRNA ligase -
  B7R57_RS00145 (B7R57_00145) spxA 30574..30969 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  B7R57_RS00150 (B7R57_00150) mecA 31340..32059 (+) 720 WP_001217723.1 adaptor protein MecA -
  B7R57_RS00155 (B7R57_00155) coiA 32180..33166 (+) 987 WP_000959292.1 competence protein CoiA Machinery gene
  B7R57_RS00160 (B7R57_00160) pepF 33214..35022 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  B7R57_RS00165 (B7R57_00165) yjbH 35482..36288 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  B7R57_RS00170 (B7R57_00170) - 36311..36676 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  B7R57_RS00175 (B7R57_00175) - 36780..37373 (-) 594 WP_000224611.1 CYTH domain-containing protein -
  B7R57_RS00180 (B7R57_00180) - 37559..37906 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38884.55 Da        Isoelectric Point: 9.7683

>NTDB_id=225269 B7R57_RS00155 WP_000959292.1 32180..33166(+) (coiA) [Staphylococcus aureus strain K5]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDK
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=225269 B7R57_RS00155 WP_000959292.1 32180..33166(+) (coiA) [Staphylococcus aureus strain K5]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAAA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

99.39

100

0.994
  coiA Staphylococcus aureus N315

97.561

100

0.976

Multiple sequence alignment