Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | B7P03_RS06560 | Genome accession | NZ_CP020618 |
| Coordinates | 1363341..1363736 (+) | Length | 131 a.a. |
| NCBI ID | WP_087436802.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis subsp. hominis strain K1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1358341..1368736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7P03_RS06530 (B7P03_06520) | atpD | 1358445..1359857 (+) | 1413 | WP_087436800.1 | F0F1 ATP synthase subunit beta | - |
| B7P03_RS06535 (B7P03_06525) | - | 1359879..1360280 (+) | 402 | WP_002448708.1 | F0F1 ATP synthase subunit epsilon | - |
| B7P03_RS06540 (B7P03_06530) | - | 1360590..1360820 (+) | 231 | WP_002448711.1 | DUF1146 family protein | - |
| B7P03_RS06545 (B7P03_06535) | murA | 1360927..1362192 (+) | 1266 | WP_071860165.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| B7P03_RS06550 (B7P03_06540) | fabZ | 1362220..1362657 (+) | 438 | WP_002448673.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| B7P03_RS06555 (B7P03_06545) | - | 1362707..1363147 (-) | 441 | WP_087436801.1 | YwpF-like family protein | - |
| B7P03_RS06560 (B7P03_06550) | ssb | 1363341..1363736 (+) | 396 | WP_087436802.1 | single-stranded DNA-binding protein | Machinery gene |
| B7P03_RS06565 (B7P03_06555) | - | 1364141..1364887 (+) | 747 | WP_087436803.1 | transglycosylase family protein | - |
| B7P03_RS06570 (B7P03_06560) | tenA | 1365279..1365968 (+) | 690 | WP_019835613.1 | thiaminase II | - |
| B7P03_RS06575 (B7P03_06565) | thiD | 1365961..1366782 (+) | 822 | WP_087436804.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| B7P03_RS06580 (B7P03_06570) | thiM | 1366775..1367563 (+) | 789 | WP_087436805.1 | hydroxyethylthiazole kinase | - |
| B7P03_RS06585 (B7P03_06575) | thiE | 1367566..1368204 (+) | 639 | WP_002448695.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15135.34 Da Isoelectric Point: 7.8335
>NTDB_id=225037 B7P03_RS06560 WP_087436802.1 1363341..1363736(+) (ssb) [Staphylococcus hominis subsp. hominis strain K1]
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKNENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDHLELMNIK
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKNENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDHLELMNIK
Nucleotide
Download Length: 396 bp
>NTDB_id=225037 B7P03_RS06560 WP_087436802.1 1363341..1363736(+) (ssb) [Staphylococcus hominis subsp. hominis strain K1]
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAAATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAGCTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAAATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAGCTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |