Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   B6N58_RS03785 Genome accession   NZ_CP020614
Coordinates   806897..807562 (+) Length   221 a.a.
NCBI ID   WP_045099937.1    Uniprot ID   -
Organism   Legionella micdadei strain NZ2015     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 801897..812562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6N58_RS03765 (B6N58_03765) comFC 802601..803296 (-) 696 WP_102010556.1 ComF family protein Machinery gene
  B6N58_RS03770 (B6N58_03770) bioC 803470..804327 (+) 858 WP_045100738.1 malonyl-ACP O-methyltransferase BioC -
  B6N58_RS03775 (B6N58_03775) dacB 804417..805847 (+) 1431 WP_045099939.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  B6N58_RS03780 (B6N58_03780) phhA 805931..806749 (+) 819 WP_045099938.1 phenylalanine 4-monooxygenase -
  B6N58_RS03785 (B6N58_03785) letA 806897..807562 (+) 666 WP_045099937.1 two-component system response regulator LetA Regulator
  B6N58_RS03790 (B6N58_03790) uvrC 807746..809602 (+) 1857 WP_045099936.1 excinuclease ABC subunit UvrC -
  B6N58_RS03795 (B6N58_03795) - 809830..810555 (+) 726 WP_045099935.1 L,D-transpeptidase -
  B6N58_RS03800 (B6N58_03800) - 810552..811091 (+) 540 WP_045099934.1 hypothetical protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 24749.94 Da        Isoelectric Point: 5.6960

>NTDB_id=224959 B6N58_RS03785 WP_045099937.1 806897..807562(+) (letA) [Legionella micdadei strain NZ2015]
MIKVLIVDDHALVRMGIRRLLDDLPDMEVVADAESGEQALALVKSHKPDVVLLDMKMPGIDGWEVTRRLKKSHPQVKVIA
VTAMCAEPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVSKGEKYLSAEIAQKMAINSLEAVQDSPFDLLSEREMQVMLMI
TRGMTVQDIADRLFLSSKTINGYRYRMFEKLGIKNDVELTFLAMKHRVIEQPNDDALHDEG

Nucleotide


Download         Length: 666 bp        

>NTDB_id=224959 B6N58_RS03785 WP_045099937.1 806897..807562(+) (letA) [Legionella micdadei strain NZ2015]
TTGATAAAAGTGCTAATTGTTGATGACCACGCTCTTGTGCGAATGGGAATTCGACGATTATTAGATGACCTGCCTGACAT
GGAGGTAGTTGCGGATGCTGAGAGTGGCGAACAGGCGTTGGCTTTGGTTAAAAGCCATAAGCCTGACGTTGTGCTGCTCG
ATATGAAGATGCCAGGAATAGATGGCTGGGAGGTAACGAGGCGACTTAAAAAATCCCATCCGCAAGTCAAAGTCATTGCT
GTAACCGCCATGTGTGCCGAACCATTACCTACTCGAGTTTTGCAGTTAGGCGCTATGGGTTATCTAACAAAAGAGTCGGG
TGCTGAAGAAATGGCAGCGGCAATTCGCAAGGTCTCTAAAGGTGAAAAATACCTAAGTGCCGAAATTGCCCAAAAAATGG
CAATTAATAGTCTAGAGGCTGTGCAAGATTCCCCATTTGACTTGCTGTCAGAGCGGGAAATGCAAGTGATGCTGATGATC
ACGAGAGGTATGACAGTACAGGATATTGCTGACCGTCTATTCTTAAGCTCCAAAACCATTAACGGTTATCGCTACCGCAT
GTTTGAGAAATTAGGAATCAAGAATGATGTTGAACTTACCTTCTTAGCAATGAAACATCGGGTCATCGAACAGCCTAATG
ATGATGCTTTGCATGATGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

88.785

96.833

0.86

  letA Legionella pneumophila strain ERS1305867

88.785

96.833

0.86


Multiple sequence alignment