Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   C1703_RS11995 Genome accession   NZ_CP026121
Coordinates   2612921..2614654 (+) Length   577 a.a.
NCBI ID   WP_114252173.1    Uniprot ID   -
Organism   Streptomyces sp. Go-475     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2607921..2619654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1703_RS11965 (C1703_11795) - 2609397..2610305 (+) 909 WP_114252167.1 Tat pathway signal protein -
  C1703_RS11985 (C1703_11815) - 2610914..2611219 (+) 306 WP_114252169.1 YtxH domain-containing protein -
  C1703_RS11990 (C1703_11820) - 2611373..2612818 (+) 1446 WP_114252171.1 FGGY family carbohydrate kinase -
  C1703_RS11995 (C1703_11825) rcrP 2612921..2614654 (+) 1734 WP_114252173.1 ABC transporter ATP-binding protein Regulator
  C1703_RS12000 (C1703_11830) rcrQ 2614654..2616582 (+) 1929 WP_114252175.1 ABC transporter ATP-binding protein Regulator
  C1703_RS12005 (C1703_11835) - 2616735..2618027 (-) 1293 WP_114252177.1 RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 577 a.a.        Molecular weight: 62784.82 Da        Isoelectric Point: 5.7512

>NTDB_id=224760 C1703_RS11995 WP_114252173.1 2612921..2614654(+) (rcrP) [Streptomyces sp. Go-475]
MLIRLLRSYLRPYKRPIALLVLLQFLQTCATLYLPTLNADIIDQGVVNGDTGYIMGYGGLMIGISLVQVVCNIGAVYYGA
RTASALGRDVRGAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMTFTLLVSAPIMCVGGIVLALGLDVPLSGV
LVAVVPVLGICVTLIVRRLRPLFRSMQERLDAVNRVLREQITGNRVIRAFVRDEYEQQRFRKANTDLTDFALGTGNLLAL
MFPIVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTSSSVVP
PSAPVRELRRHGHLEIRGAGFRYPGAEEPVLRAVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGQVLVDGVEVA
EIDPQLLAKTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQGKEFVERLEGGLDAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALTRETAEATVVIVAQRVATIRDADRIVVLDEGRVVGTGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=224760 C1703_RS11995 WP_114252173.1 2612921..2614654(+) (rcrP) [Streptomyces sp. Go-475]
GTGCTCATACGACTTCTGCGAAGTTATCTCAGGCCCTACAAGAGACCCATCGCCCTGCTGGTGCTGCTGCAGTTCCTGCA
GACCTGCGCCACGCTCTACCTGCCGACGCTGAACGCGGACATCATCGACCAGGGTGTCGTCAACGGCGACACCGGCTACA
TCATGGGCTACGGCGGCCTGATGATCGGCATCTCGCTGGTGCAGGTCGTGTGCAACATCGGGGCCGTGTACTACGGCGCG
CGGACGGCGTCGGCGCTCGGGCGGGATGTGCGCGGTGCCGTGTTCGACCGGGTGCAGTCGTTCTCGGCGCGTGAGGTCGG
TCACTTCGGGGCGCCGTCGCTGATCACCCGGACGACGAACGACGTCCAGCAGGTGCAGATGCTGGCGCTGATGACGTTCA
CGCTGCTGGTGTCGGCGCCGATCATGTGCGTGGGCGGCATCGTGCTGGCGCTCGGGCTCGACGTGCCGCTGTCCGGGGTG
CTGGTGGCGGTCGTGCCGGTGCTGGGGATCTGCGTGACGCTGATCGTGCGGCGGCTGCGGCCGCTGTTCCGGTCGATGCA
GGAGCGGCTGGACGCGGTGAACCGGGTGCTGCGCGAGCAGATCACGGGCAACCGGGTCATCCGGGCCTTCGTCCGGGACG
AGTACGAGCAGCAGCGCTTCCGGAAGGCCAACACCGACCTCACCGACTTCGCGCTGGGCACCGGCAACCTGCTGGCGCTG
ATGTTCCCGATCGTGATGACGGTGGTGAACCTGTCGTCGATCGCCGTTGTGTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGGATGCAGATCGGTGACCTGACGGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCATCCAGGAGGTACTGGACACCTCCTCCAGCGTGGTGCCG
CCGTCGGCGCCGGTGCGGGAGCTGCGCCGGCACGGGCATCTGGAGATCCGCGGGGCCGGCTTCCGCTACCCGGGTGCCGA
GGAGCCGGTGCTGCGGGCCGTGGACCTGGTGGCCCGGCCGGGTGAGACGACCGCCGTGATCGGCTCGACCGGCAGCGGCA
AGTCGACCCTGCTCGGGCTGGTCCCGCGGCTGTTCGACGCGACCGAGGGGCAGGTGCTCGTCGACGGGGTCGAGGTGGCG
GAGATCGACCCGCAGCTGCTCGCGAAGACCGTCGGGCTGGTGCCGCAGAAGCCGTACCTGTTCGCGGGGACGGTGGCGAC
CAACCTGCGCTACGGCAATCCCGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGGCAAGGAGTTCG
TGGAGCGGCTGGAGGGCGGGCTCGACGCGCCGATCTCCCAGGGCGGGACGAACGTCTCCGGCGGGCAGCGGCAGCGGCTC
GCGATCGCCAGGACGCTGGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGCCACGGA
CGCCGCGCTGCGGGCCGCCCTCACGCGGGAGACCGCCGAGGCGACCGTGGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGGGTCGTCGGCACCGGCCGGCACCACGAGCTGATGGCGGACAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACGGAAGCGGAGGCTGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.581

100

0.386


Multiple sequence alignment