Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | B7L41_RS19210 | Genome accession | NZ_CP020595 |
| Coordinates | 3867317..3867790 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214060.1 | Uniprot ID | A0A0J0ZM89 |
| Organism | Acinetobacter baumannii strain USA15 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3862317..3872790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L41_RS19195 (B7L41_19195) | pilX | 3864946..3865764 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| B7L41_RS19200 (B7L41_19200) | pilW | 3865761..3866762 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| B7L41_RS19205 (B7L41_19205) | pilV | 3866763..3867323 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| B7L41_RS19210 (B7L41_19210) | fimU | 3867317..3867790 (-) | 474 | WP_001214060.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| B7L41_RS19215 (B7L41_19215) | ispH | 3867960..3868910 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| B7L41_RS19220 (B7L41_19220) | gmk | 3869033..3869662 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| B7L41_RS19225 (B7L41_19225) | rpoZ | 3869735..3870013 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| B7L41_RS19750 | - | 3870052..3870182 (+) | 131 | Protein_3634 | hypothetical protein | - |
| B7L41_RS19230 (B7L41_19230) | - | 3870222..3872327 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16883.50 Da Isoelectric Point: 8.5355
>NTDB_id=224764 B7L41_RS19210 WP_001214060.1 3867317..3867790(-) (fimU) [Acinetobacter baumannii strain USA15]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=224764 B7L41_RS19210 WP_001214060.1 3867317..3867790(-) (fimU) [Acinetobacter baumannii strain USA15]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |