Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L40_RS14190 | Genome accession | NZ_CP020591 |
| Coordinates | 2953225..2953605 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain SSA6 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2948225..2958605
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L40_RS14160 (B7L40_14160) | kdsB | 2949128..2949889 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| B7L40_RS14165 (B7L40_14165) | - | 2949901..2950881 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| B7L40_RS14170 (B7L40_14170) | - | 2950893..2951234 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L40_RS14175 (B7L40_14175) | - | 2951252..2952025 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| B7L40_RS14180 (B7L40_14180) | - | 2952063..2952671 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L40_RS14185 (B7L40_14185) | - | 2952681..2953235 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| B7L40_RS14190 (B7L40_14190) | xcpV | 2953225..2953605 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L40_RS14195 (B7L40_14195) | xcpW | 2953605..2954306 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| B7L40_RS14200 (B7L40_14200) | gspK | 2954306..2955265 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| B7L40_RS14205 (B7L40_14205) | - | 2955496..2956092 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L40_RS14210 (B7L40_14210) | ung | 2956143..2956856 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| B7L40_RS14215 (B7L40_14215) | - | 2956853..2957977 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L40_RS14220 (B7L40_14220) | tadA | 2957984..2958487 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=224672 B7L40_RS14190 WP_000836911.1 2953225..2953605(+) (xcpV) [Acinetobacter baumannii strain SSA6]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224672 B7L40_RS14190 WP_000836911.1 2953225..2953605(+) (xcpV) [Acinetobacter baumannii strain SSA6]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |