Detailed information NTG0224673

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B7L40_RS14195
• Genome accession: NZ_CP020591
• Coordinates: 2953605..2954306 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SSA6
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2948605..2959306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L40_RS14160 (B7L40_14160)	kdsB	2949128..2949889 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
B7L40_RS14165 (B7L40_14165)	-	2949901..2950881 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
B7L40_RS14170 (B7L40_14170)	-	2950893..2951234 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
B7L40_RS14175 (B7L40_14175)	-	2951252..2952025 (+)	774	WP_000497298.1	TatD family hydrolase	-
B7L40_RS14180 (B7L40_14180)	-	2952063..2952671 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B7L40_RS14185 (B7L40_14185)	-	2952681..2953235 (+)	555	WP_000841373.1	type II secretion system protein	-
B7L40_RS14190 (B7L40_14190)	xcpV	2953225..2953605 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
B7L40_RS14195 (B7L40_14195)	xcpW	2953605..2954306 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B7L40_RS14200 (B7L40_14200)	gspK	2954306..2955265 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
B7L40_RS14205 (B7L40_14205)	-	2955496..2956092 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
B7L40_RS14210 (B7L40_14210)	ung	2956143..2956856 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
B7L40_RS14215 (B7L40_14215)	-	2956853..2957977 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
B7L40_RS14220 (B7L40_14220)	tadA	2957984..2958487 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
B7L40_RS14225 (B7L40_14225)	-	2958557..2959000 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=224673 B7L40_RS14195 WP_000594589.1 2953605..2954306(+) (xcpW) [Acinetobacter baumannii strain SSA6]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=224673 B7L40_RS14195 WP_000594589.1 2953605..2954306(+) (xcpW) [Acinetobacter baumannii strain SSA6]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996