Detailed information NTG0224546

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: C2E46_RS11250
• Genome accession: NZ_CP026082
• Coordinates: 2255524..2256633 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain YZ1605
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2250524..2261633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2E46_RS11225 (C2E46_11655)	-	2250896..2251735 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
C2E46_RS11230 (C2E46_11660)	pgsA	2251735..2252277 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
C2E46_RS11235 (C2E46_11665)	-	2252400..2253683 (-)	1284	WP_161501972.1	pitrilysin family protein	-
C2E46_RS11240 (C2E46_11670)	-	2253685..2254929 (-)	1245	WP_000706188.1	pitrilysin family protein	-
C2E46_RS11245 (C2E46_11675)	yaaA	2255168..2255521 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
C2E46_RS11250 (C2E46_11680)	recF	2255524..2256633 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
C2E46_RS11255 (C2E46_11685)	-	2256741..2258195 (+)	1455	WP_031463830.1	IS1182-like element IS1563 family transposase	-
C2E46_RS11260 (C2E46_11690)	-	2258207..2259073 (-)	867	WP_000398683.1	GRP family sugar transporter	-
C2E46_RS11265 (C2E46_11695)	-	2259129..2259791 (-)	663	WP_001873330.1	helix-turn-helix transcriptional regulator	-
C2E46_RS11270 (C2E46_11700)	guaB	2259866..2261347 (-)	1482	WP_000073397.1	IMP dehydrogenase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=224546 C2E46_RS11250 WP_000264870.1 2255524..2256633(+) (recF) [Streptococcus agalactiae strain YZ1605]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=224546 C2E46_RS11250 WP_000264870.1 2255524..2256633(+) (recF) [Streptococcus agalactiae strain YZ1605]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447