Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | B7D75_RS23440 | Genome accession | NZ_CP020560 |
| Coordinates | 4946498..4947055 (+) | Length | 185 a.a. |
| NCBI ID | WP_053814569.1 | Uniprot ID | - |
| Organism | Pseudomonas paraeruginosa strain Cr1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4941498..4952055
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7D75_RS23420 (B7D75_23435) | pilR | 4942774..4944111 (+) | 1338 | WP_033999343.1 | two-component system response regulator PilR | Regulator |
| B7D75_RS23425 (B7D75_23440) | thiO | 4944157..4945251 (-) | 1095 | WP_041025522.1 | glycine oxidase ThiO | - |
| B7D75_RS23430 (B7D75_23445) | - | 4945386..4945895 (+) | 510 | WP_003150026.1 | GspH/FimT family pseudopilin | - |
| B7D75_RS23435 (B7D75_23450) | - | 4946001..4946507 (+) | 507 | WP_012077308.1 | Tfp pilus assembly protein FimT/FimU | - |
| B7D75_RS23440 (B7D75_23455) | pilV | 4946498..4947055 (+) | 558 | WP_053814569.1 | type IV pilus modification protein PilV | Machinery gene |
| B7D75_RS23445 (B7D75_23460) | pilW | 4947052..4947876 (+) | 825 | WP_034081447.1 | type 4a pilus minor pilin PilW | - |
| B7D75_RS23450 (B7D75_23465) | pilX | 4947873..4948460 (+) | 588 | WP_034081449.1 | type 4a pilus minor pilin PilX | - |
| B7D75_RS23455 (B7D75_23470) | pilY1 | 4948472..4951938 (+) | 3467 | Protein_4564 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20013.26 Da Isoelectric Point: 8.2269
>NTDB_id=224134 B7D75_RS23440 WP_053814569.1 4946498..4947055(+) (pilV) [Pseudomonas paraeruginosa strain Cr1]
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAVDLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAVDLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=224134 B7D75_RS23440 WP_053814569.1 4946498..4947055(+) (pilV) [Pseudomonas paraeruginosa strain Cr1]
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
AAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGTGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
AAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGTGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
90.27 |
100 |
0.903 |