Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | B5S57_RS07505 | Genome accession | NZ_CP020534 |
| Coordinates | 419051..419653 (+) | Length | 200 a.a. |
| NCBI ID | WP_013855886.1 | Uniprot ID | A0AAW4AFV0 |
| Organism | Vibrio anguillarum strain 425 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 414051..424653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S57_RS07490 (B5S57_07380) | oxyR | 414476..415366 (+) | 891 | WP_026027425.1 | DNA-binding transcriptional regulator OxyR | - |
| B5S57_RS07495 (B5S57_07385) | - | 415403..417901 (-) | 2499 | WP_013855884.1 | penicillin-binding protein 1A | - |
| B5S57_RS07500 (B5S57_07390) | pilM | 418051..419061 (+) | 1011 | WP_013855885.1 | type IV pilus assembly protein PilM | Machinery gene |
| B5S57_RS07505 (B5S57_07395) | pilN | 419051..419653 (+) | 603 | WP_013855886.1 | PilN domain-containing protein | Machinery gene |
| B5S57_RS07510 (B5S57_07400) | pilO | 419646..420239 (+) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| B5S57_RS07515 (B5S57_07405) | pilP | 420226..420747 (+) | 522 | WP_013855888.1 | pilus assembly protein PilP | Machinery gene |
| B5S57_RS07520 (B5S57_07410) | pilQ | 420771..422486 (+) | 1716 | WP_013855889.1 | type IV pilus secretin PilQ | Machinery gene |
| B5S57_RS07525 (B5S57_07415) | aroK | 422673..423194 (+) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| B5S57_RS07530 (B5S57_07420) | aroB | 423219..424307 (+) | 1089 | WP_026027894.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 22702.27 Da Isoelectric Point: 9.6928
>NTDB_id=223943 B5S57_RS07505 WP_013855886.1 419051..419653(+) (pilN) [Vibrio anguillarum strain 425]
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQLQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGSVLTKIRPTGAVHD
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQLQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGSVLTKIRPTGAVHD
Nucleotide
Download Length: 603 bp
>NTDB_id=223943 B5S57_RS07505 WP_013855886.1 419051..419653(+) (pilN) [Vibrio anguillarum strain 425]
ATGTTGCATAGCATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCACAGCTGCAAGAGTCTC
GTCTGGCCTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTG
CACGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCTC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
ATGTTGCATAGCATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCACAGCTGCAAGAGTCTC
GTCTGGCCTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTG
CACGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCTC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
67.553 |
94 |
0.635 |
| pilN | Vibrio campbellii strain DS40M4 |
65.591 |
93 |
0.61 |