Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   CHELV3228_RS08000 Genome accession   NZ_CP020478
Coordinates   1514368..1515012 (-) Length   214 a.a.
NCBI ID   WP_082200487.1    Uniprot ID   -
Organism   Campylobacter helveticus strain ATCC 51209     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1509368..1520012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHELV3228_RS07970 (CHELV3228_1569) - 1510158..1510484 (+) 327 WP_082200481.1 rhodanese-like domain-containing protein -
  CHELV3228_RS07975 (CHELV3228_1570) - 1510481..1510915 (+) 435 WP_082200482.1 hypothetical protein -
  CHELV3228_RS07980 (CHELV3228_1571) - 1510926..1512731 (+) 1806 WP_082200483.1 Na/Pi symporter -
  CHELV3228_RS07985 (CHELV3228_1573) - 1513268..1513465 (-) 198 WP_082200484.1 hypothetical protein -
  CHELV3228_RS07990 (CHELV3228_1574) - 1513551..1513754 (-) 204 WP_082200485.1 EexN family lipoprotein -
  CHELV3228_RS07995 (CHELV3228_1575) - 1513754..1514368 (-) 615 WP_082200486.1 trimeric intracellular cation channel family protein -
  CHELV3228_RS08000 (CHELV3228_1576) CJE1441 1514368..1515012 (-) 645 WP_082200487.1 DNA/RNA non-specific endonuclease Regulator
  CHELV3228_RS08005 (CHELV3228_1577) nth 1515009..1515644 (-) 636 WP_082200488.1 endonuclease III -
  CHELV3228_RS08010 (CHELV3228_1578) - 1515725..1516540 (+) 816 WP_082200489.1 peptidylprolyl isomerase -
  CHELV3228_RS08015 (CHELV3228_1579) fbaA 1516540..1517604 (+) 1065 WP_082200490.1 class II fructose-bisphosphate aldolase -
  CHELV3228_RS08020 (CHELV3228_1580) - 1517680..1519038 (+) 1359 WP_082200491.1 MotA/TolQ/ExbB proton channel family protein -
  CHELV3228_RS08025 (CHELV3228_1581) - 1519025..1519966 (+) 942 WP_082200784.1 OmpA family protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 25502.48 Da        Isoelectric Point: 9.6801

>NTDB_id=223624 CHELV3228_RS08000 WP_082200487.1 1514368..1515012(-) (CJE1441) [Campylobacter helveticus strain ATCC 51209]
MRILILLTIFTLSLFAKYELDEEFKGYFNQLNCSIILDKFYYINCYDYNLKGSKALAYEVKAENLKLEQIKKRPRFEEDF
ALAKKYRSRWEDYKNSSYSRGHIAPNASFSYSVASQKAVFLMSNITPQNFQINNKIWNDIEKRERKLALKFQKLDVLNLI
LYNENPKRIKNHIAIPSFYIKIFKTKNYKECYKVPNHNVDDENIVAYKISCEAF

Nucleotide


Download         Length: 645 bp        

>NTDB_id=223624 CHELV3228_RS08000 WP_082200487.1 1514368..1515012(-) (CJE1441) [Campylobacter helveticus strain ATCC 51209]
ATGAGAATTTTAATTTTACTAACCATTTTTACCCTTAGCCTTTTTGCAAAATATGAGCTAGATGAGGAATTTAAGGGCTA
TTTTAATCAACTAAATTGCTCTATTATTTTGGATAAATTTTATTATATTAATTGTTACGATTATAATTTAAAGGGTTCAA
AAGCCCTAGCATATGAAGTGAAAGCAGAAAATTTAAAACTAGAGCAAATCAAAAAAAGACCAAGATTTGAAGAGGACTTT
GCTCTTGCTAAAAAATATAGAAGTCGGTGGGAAGATTATAAAAATAGCTCTTATAGTAGAGGACATATAGCGCCAAACGC
CTCTTTTAGCTACTCCGTTGCTTCGCAAAAGGCTGTATTTTTGATGAGTAATATTACCCCACAAAATTTTCAAATTAATA
ATAAAATTTGGAATGATATAGAAAAAAGAGAAAGAAAACTTGCCCTTAAATTTCAAAAATTGGATGTTTTAAATCTCATA
CTTTATAATGAAAACCCTAAACGCATTAAAAATCACATCGCTATCCCTAGTTTTTACATCAAAATTTTTAAAACTAAAAA
TTACAAAGAATGCTATAAAGTGCCAAATCATAATGTTGATGATGAAAACATCGTAGCTTATAAAATTTCTTGTGAAGCTT
TTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

60.5

93.458

0.565
  CJE0566 Campylobacter jejuni RM1221

61.111

92.523

0.565

Multiple sequence alignment