Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB477_RS08120 | Genome accession | NZ_CP020467 |
| Coordinates | 1636140..1636439 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain CFSAN007896 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1631140..1641439
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB477_RS08095 (AB477_08145) | gcvPA | 1632352..1633698 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AB477_RS08100 (AB477_08150) | gcvT | 1633718..1634809 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB477_RS08105 (AB477_08155) | - | 1634968..1635492 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| AB477_RS08110 (AB477_08160) | - | 1635482..1635628 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB477_RS08115 (AB477_08165) | comGF | 1635725..1636222 (-) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB477_RS08120 (AB477_08170) | comGE | 1636140..1636439 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB477_RS08125 (AB477_08175) | comGD | 1636426..1636872 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB477_RS08130 (AB477_08180) | comGC | 1636850..1637161 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB477_RS08135 (AB477_08185) | comGB | 1637175..1638245 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB477_RS08140 (AB477_08190) | comGA | 1638217..1639191 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB477_RS08145 (AB477_08195) | - | 1639243..1639866 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB477_RS08150 (AB477_08200) | - | 1639863..1640192 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB477_RS08155 (AB477_08205) | - | 1640192..1641178 (-) | 987 | WP_107375228.1 | ROK family glucokinase | - |
| AB477_RS08160 (AB477_08210) | - | 1641175..1641378 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=223502 AB477_RS08120 WP_000844413.1 1636140..1636439(-) (comGE) [Staphylococcus aureus strain CFSAN007896]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=223502 AB477_RS08120 WP_000844413.1 1636140..1636439(-) (comGE) [Staphylococcus aureus strain CFSAN007896]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |