Detailed information NTG0223316

Bioinformatically predicted

Overview

• Name: pilL
• Type: Machinery gene
• Locus tag: A6J88_RS24815
• Genome accession: NZ_CP020452
• Coordinates: 2152084..2152566 (+)
• Length: 160 a.a.
• NCBI ID: WP_080614206.1
• Uniprot ID: -
• Organism: Neisseria mucosa strain FDAARGOS_260
• Function: type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2152712..2154623	2152084..2152566	flank	146

Gene organization within MGE regions

Location: 2152084..2154623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J88_RS24815 (A6J88_10585)	pilL	2152084..2152566 (+)	483	WP_080614206.1	PilX family type IV pilin	Machinery gene
A6J88_RS24820 (A6J88_10590)	-	2152712..2153113 (-)	402	Protein_1990	transposase	-
A6J88_RS24825 (A6J88_10595)	-	2153164..2154011 (+)	848	WP_099048475.1	IS630 family transposase	-
A6J88_RS24830 (A6J88_10600)	-	2154014..2154623 (-)	610	Protein_1992	transposase	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17546.10 Da
• Isoelectric Point: 9.1468

>NTDB_id=223316 A6J88_RS24815 WP_080614206.1 2152084..2152566(+) (pilL) [Neisseria mucosa strain FDAARGOS_260]
MNTSITKSQGFTLVEMLIVVAIIGILSTIAYPSYIHYIERGYQSQAHTELLAINNALKTKLVKNPTLKIKDEIEGDTGLV
KTYKAAPEVAAKYDFSGEMKNKDAKNSRAYYLFATPKTGTDYKLSVWMDSLGNAYKCTDAESAKAKLTSKNGNTGCEQVG

Nucleotide

• Length: 483 bp

>NTDB_id=223316 A6J88_RS24815 WP_080614206.1 2152084..2152566(+) (pilL) [Neisseria mucosa strain FDAARGOS_260]
ATGAATACGTCTATCACTAAATCTCAAGGGTTTACGCTGGTTGAGATGCTGATTGTCGTTGCTATCATCGGCATCCTCAG
TACCATCGCTTACCCTTCCTATATCCATTACATCGAACGCGGCTACCAATCTCAGGCGCATACGGAACTGCTTGCTATTA
ACAATGCCTTGAAAACCAAATTAGTCAAAAATCCTACCCTCAAAATAAAAGATGAAATTGAGGGAGATACGGGATTGGTT
AAGACCTACAAAGCTGCGCCCGAGGTTGCTGCCAAATACGACTTCAGCGGTGAAATGAAAAATAAGGACGCTAAAAACAG
CAGGGCTTATTATCTTTTTGCCACTCCGAAAACCGGTACTGATTACAAACTTTCCGTTTGGATGGATAGTTTGGGTAATG
CCTACAAGTGTACCGATGCAGAATCGGCCAAAGCCAAGTTAACAAGTAAAAACGGTAATACAGGCTGTGAACAGGTAGGT
TGA

Domains

Predicted by InterproScan.

• Minor type IV pilin, PilX (Pilin_PilX) (37-158)

• Prokaryotic N-terminal methylation motif (N_methyl) (7-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilL	Neisseria gonorrhoeae MS11	51.282	97.5	0.5
pilX	Neisseria meningitidis 8013	50.649	96.25	0.487