Detailed information NTG0223315

Bioinformatically predicted

Overview

• Name: pilK
• Type: Machinery gene
• Locus tag: A6J88_RS24810
• Genome accession: NZ_CP020452
• Coordinates: 2151458..2152066 (+)
• Length: 202 a.a.
• NCBI ID: WP_080614205.1
• Uniprot ID: -
• Organism: Neisseria mucosa strain FDAARGOS_260
• Function: type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2152712..2154623	2151458..2152066	flank	646

Gene organization within MGE regions

Location: 2151458..2154623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J88_RS24810 (A6J88_10580)	pilK	2151458..2152066 (+)	609	WP_080614205.1	pilus assembly PilX family protein	Machinery gene
A6J88_RS24815 (A6J88_10585)	pilL	2152084..2152566 (+)	483	WP_080614206.1	PilX family type IV pilin	Machinery gene
A6J88_RS24820 (A6J88_10590)	-	2152712..2153113 (-)	402	Protein_1990	transposase	-
A6J88_RS24825 (A6J88_10595)	-	2153164..2154011 (+)	848	WP_099048475.1	IS630 family transposase	-
A6J88_RS24830 (A6J88_10600)	-	2154014..2154623 (-)	610	Protein_1992	transposase	-

Sequence

Protein

• Length: 202 a.a.
• Molecular weight: 22323.27 Da
• Isoelectric Point: 7.1444

>NTDB_id=223315 A6J88_RS24810 WP_080614205.1 2151458..2152066(+) (pilK) [Neisseria mucosa strain FDAARGOS_260]
MRRPITLNHPAKASAQTGFALFIVLMIMIVIALLVVTATQSYNTEQRISTNDADHKFATTLAEAALREGENYIYEIEDGT
TTFDDDCTNGLCKAKSLPASKPSEPYTTTTGKVIVEGNSTEEAWHRECGKDKVKCIDINGIPYPGKNSGAKKNCRPKKDA
CYIIEYLSTNSTDNRTIYRVTAKAWGKNENTVVILQSYVANE

Nucleotide

• Length: 609 bp

>NTDB_id=223315 A6J88_RS24810 WP_080614205.1 2151458..2152066(+) (pilK) [Neisseria mucosa strain FDAARGOS_260]
ATGCGCAGACCGATTACTTTAAACCATCCTGCTAAAGCCTCTGCACAAACAGGCTTCGCATTATTCATTGTTCTGATGAT
TATGATCGTCATCGCCTTGCTCGTCGTTACCGCAACCCAGTCCTATAATACCGAGCAGCGTATCAGTACAAATGACGCCG
ACCATAAATTTGCTACCACACTTGCGGAAGCAGCATTGCGTGAAGGTGAAAACTATATTTATGAGATTGAAGATGGAACA
ACAACCTTTGATGATGATTGTACAAATGGCCTTTGTAAAGCGAAATCACTCCCCGCGTCGAAGCCCAGTGAACCATATAC
CACCACCACAGGCAAAGTAATAGTAGAAGGGAATTCCACTGAAGAGGCTTGGCATAGAGAATGTGGCAAAGATAAAGTTA
AGTGCATTGATATTAACGGTATCCCCTATCCTGGCAAAAATAGCGGAGCTAAAAAAAATTGCAGACCTAAAAAAGATGCG
TGTTACATCATCGAATACCTAAGCACCAACTCCACCGACAACCGTACCATTTACCGCGTTACCGCCAAAGCATGGGGGAA
AAACGAAAATACGGTGGTTATACTACAATCTTATGTGGCCAACGAATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilX C-term (PilX) (110-200)

• PilX N-terminal (PilX_N) (18-67)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilK	Neisseria gonorrhoeae MS11	48.325	100	0.5