Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | A6J88_RS18960 | Genome accession | NZ_CP020452 |
| Coordinates | 971522..972076 (+) | Length | 184 a.a. |
| NCBI ID | WP_060974925.1 | Uniprot ID | - |
| Organism | Neisseria mucosa strain FDAARGOS_260 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 966522..977076
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J88_RS18940 (A6J88_04870) | - | 966546..968945 (-) | 2400 | WP_049225923.1 | penicillin-binding protein 1A | - |
| A6J88_RS18945 (A6J88_04875) | pilM | 969092..970201 (+) | 1110 | WP_039408903.1 | type IV pilus assembly protein PilM | - |
| A6J88_RS18950 (A6J88_04880) | pilN | 970203..970817 (+) | 615 | WP_060974923.1 | PilN domain-containing protein | Machinery gene |
| A6J88_RS18955 (A6J88_04885) | - | 970818..971504 (+) | 687 | WP_080613699.1 | type 4a pilus biogenesis protein PilO | - |
| A6J88_RS18960 (A6J88_04890) | pilP | 971522..972076 (+) | 555 | WP_060974925.1 | pilus assembly protein PilP | Machinery gene |
| A6J88_RS18965 (A6J88_04895) | pilQ | 972095..974230 (+) | 2136 | WP_080613700.1 | type IV pilus secretin PilQ | Machinery gene |
| A6J88_RS18970 (A6J88_04900) | - | 974397..975263 (+) | 867 | Protein_908 | IS630 family transposase | - |
| A6J88_RS18975 (A6J88_04905) | - | 975456..975872 (+) | 417 | WP_060974909.1 | DNA modification methylase | - |
| A6J88_RS18980 (A6J88_04910) | - | 975970..976578 (+) | 609 | Protein_910 | transposase | - |
Sequence
Protein
Download Length: 184 a.a. Molecular weight: 20210.53 Da Isoelectric Point: 4.9305
>NTDB_id=223297 A6J88_RS18960 WP_060974925.1 971522..972076(+) (pilP) [Neisseria mucosa strain FDAARGOS_260]
MKNKIFLLTSILSLTGCTPAYDDLNEWMTKTRQDAKSHIIPFEAPVVNPPAVYNPPAYSGLNAFDFRRLDNAPKGSNAPN
PNRPKEALEAFSLENMRYVGMLSNGSKTVGFIDVNGHVYTVYPGNYIGQNYGKIQSITDDLIVLTELVEDSSGNWIYRKA
ELPLSNNAENSSNDASNASATNSN
MKNKIFLLTSILSLTGCTPAYDDLNEWMTKTRQDAKSHIIPFEAPVVNPPAVYNPPAYSGLNAFDFRRLDNAPKGSNAPN
PNRPKEALEAFSLENMRYVGMLSNGSKTVGFIDVNGHVYTVYPGNYIGQNYGKIQSITDDLIVLTELVEDSSGNWIYRKA
ELPLSNNAENSSNDASNASATNSN
Nucleotide
Download Length: 555 bp
>NTDB_id=223297 A6J88_RS18960 WP_060974925.1 971522..972076(+) (pilP) [Neisseria mucosa strain FDAARGOS_260]
ATGAAAAATAAAATTTTCTTACTTACAAGTATCCTGTCATTGACGGGGTGTACACCGGCATATGACGATTTGAATGAGTG
GATGACTAAGACACGTCAGGATGCTAAGTCTCATATCATTCCATTTGAGGCTCCGGTAGTGAACCCTCCGGCTGTTTATA
ATCCACCAGCTTACAGTGGTTTAAATGCATTCGATTTTCGACGGTTGGATAATGCACCTAAAGGTAGCAACGCTCCAAAT
CCCAATCGCCCAAAAGAAGCATTGGAAGCATTCAGTTTAGAAAATATGCGGTACGTAGGGATGCTGAGCAATGGCAGTAA
AACTGTCGGTTTTATTGATGTAAATGGACATGTCTATACAGTTTATCCGGGGAACTATATCGGACAAAATTATGGAAAAA
TCCAAAGCATTACTGATGATTTGATTGTTTTGACAGAGTTGGTTGAGGATAGTTCGGGCAATTGGATTTATCGAAAGGCG
GAATTGCCATTAAGCAATAATGCTGAAAATAGTTCAAATGATGCCAGTAATGCTTCAGCAACGAATTCAAACTAA
ATGAAAAATAAAATTTTCTTACTTACAAGTATCCTGTCATTGACGGGGTGTACACCGGCATATGACGATTTGAATGAGTG
GATGACTAAGACACGTCAGGATGCTAAGTCTCATATCATTCCATTTGAGGCTCCGGTAGTGAACCCTCCGGCTGTTTATA
ATCCACCAGCTTACAGTGGTTTAAATGCATTCGATTTTCGACGGTTGGATAATGCACCTAAAGGTAGCAACGCTCCAAAT
CCCAATCGCCCAAAAGAAGCATTGGAAGCATTCAGTTTAGAAAATATGCGGTACGTAGGGATGCTGAGCAATGGCAGTAA
AACTGTCGGTTTTATTGATGTAAATGGACATGTCTATACAGTTTATCCGGGGAACTATATCGGACAAAATTATGGAAAAA
TCCAAAGCATTACTGATGATTTGATTGTTTTGACAGAGTTGGTTGAGGATAGTTCGGGCAATTGGATTTATCGAAAGGCG
GAATTGCCATTAAGCAATAATGCTGAAAATAGTTCAAATGATGCCAGTAATGCTTCAGCAACGAATTCAAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
58.084 |
90.761 |
0.527 |