Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6J88_RS18950 | Genome accession | NZ_CP020452 |
| Coordinates | 970203..970817 (+) | Length | 204 a.a. |
| NCBI ID | WP_060974923.1 | Uniprot ID | - |
| Organism | Neisseria mucosa strain FDAARGOS_260 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 965203..975817
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J88_RS18935 (A6J88_04865) | - | 965281..966288 (-) | 1008 | WP_080613698.1 | IS5 family transposase | - |
| A6J88_RS18940 (A6J88_04870) | - | 966546..968945 (-) | 2400 | WP_049225923.1 | penicillin-binding protein 1A | - |
| A6J88_RS18945 (A6J88_04875) | pilM | 969092..970201 (+) | 1110 | WP_039408903.1 | type IV pilus assembly protein PilM | - |
| A6J88_RS18950 (A6J88_04880) | pilN | 970203..970817 (+) | 615 | WP_060974923.1 | PilN domain-containing protein | Machinery gene |
| A6J88_RS18955 (A6J88_04885) | - | 970818..971504 (+) | 687 | WP_080613699.1 | type 4a pilus biogenesis protein PilO | - |
| A6J88_RS18960 (A6J88_04890) | pilP | 971522..972076 (+) | 555 | WP_060974925.1 | pilus assembly protein PilP | Machinery gene |
| A6J88_RS18965 (A6J88_04895) | pilQ | 972095..974230 (+) | 2136 | WP_080613700.1 | type IV pilus secretin PilQ | Machinery gene |
| A6J88_RS18970 (A6J88_04900) | - | 974397..975263 (+) | 867 | Protein_908 | IS630 family transposase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23204.63 Da Isoelectric Point: 5.1925
>NTDB_id=223296 A6J88_RS18950 WP_060974923.1 970203..970817(+) (pilN) [Neisseria mucosa strain FDAARGOS_260]
MTELIKINLLPYREEIKQRKRQQFKILMLSSLLIGVGLSAIAYLAINNAISDQESRNAFLEAEITKLDNDLGEIKKLQQE
KENFLAKKQKVEELQEKRSQAAYIIDSLNVVIPDNTYITSLDAENPTSYKITGRAISDNKIAMFMRSLPSTGIFMQPELL
EIKKIDNYQEFNIKSMIGSSSIPVKSEREVINDDSTKAQNGEEK
MTELIKINLLPYREEIKQRKRQQFKILMLSSLLIGVGLSAIAYLAINNAISDQESRNAFLEAEITKLDNDLGEIKKLQQE
KENFLAKKQKVEELQEKRSQAAYIIDSLNVVIPDNTYITSLDAENPTSYKITGRAISDNKIAMFMRSLPSTGIFMQPELL
EIKKIDNYQEFNIKSMIGSSSIPVKSEREVINDDSTKAQNGEEK
Nucleotide
Download Length: 615 bp
>NTDB_id=223296 A6J88_RS18950 WP_060974923.1 970203..970817(+) (pilN) [Neisseria mucosa strain FDAARGOS_260]
ATGACTGAATTAATTAAAATTAACCTTCTTCCATATAGAGAAGAAATTAAGCAACGTAAAAGACAGCAATTTAAAATTTT
GATGCTTTCTTCGTTATTAATAGGAGTTGGTTTATCTGCAATAGCTTATTTAGCGATCAATAATGCTATTAGTGATCAAG
AAAGTAGGAATGCATTTTTGGAAGCAGAAATTACCAAGTTAGATAATGATTTAGGAGAAATAAAAAAATTACAGCAGGAA
AAAGAAAACTTCTTGGCTAAAAAGCAAAAAGTCGAGGAGTTGCAAGAAAAACGCTCCCAAGCTGCATATATCATCGACAG
TTTGAATGTGGTTATTCCAGATAATACTTATATCACATCTCTTGATGCAGAAAATCCGACCTCTTATAAGATTACAGGCC
GAGCGATTAGCGATAATAAAATTGCCATGTTTATGCGGTCTTTGCCAAGTACAGGTATTTTTATGCAGCCAGAACTCTTG
GAAATTAAGAAAATTGATAATTATCAAGAGTTCAATATTAAATCTATGATTGGTTCCTCGAGTATTCCAGTCAAGTCGGA
GAGAGAAGTAATTAATGATGATTCGACGAAAGCACAGAACGGGGAGGAAAAGTAA
ATGACTGAATTAATTAAAATTAACCTTCTTCCATATAGAGAAGAAATTAAGCAACGTAAAAGACAGCAATTTAAAATTTT
GATGCTTTCTTCGTTATTAATAGGAGTTGGTTTATCTGCAATAGCTTATTTAGCGATCAATAATGCTATTAGTGATCAAG
AAAGTAGGAATGCATTTTTGGAAGCAGAAATTACCAAGTTAGATAATGATTTAGGAGAAATAAAAAAATTACAGCAGGAA
AAAGAAAACTTCTTGGCTAAAAAGCAAAAAGTCGAGGAGTTGCAAGAAAAACGCTCCCAAGCTGCATATATCATCGACAG
TTTGAATGTGGTTATTCCAGATAATACTTATATCACATCTCTTGATGCAGAAAATCCGACCTCTTATAAGATTACAGGCC
GAGCGATTAGCGATAATAAAATTGCCATGTTTATGCGGTCTTTGCCAAGTACAGGTATTTTTATGCAGCCAGAACTCTTG
GAAATTAAGAAAATTGATAATTATCAAGAGTTCAATATTAAATCTATGATTGGTTCCTCGAGTATTCCAGTCAAGTCGGA
GAGAGAAGTAATTAATGATGATTCGACGAAAGCACAGAACGGGGAGGAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
55.932 |
86.765 |
0.485 |