Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A6J85_RS10905 Genome accession   NZ_CP020450
Coordinates   2189954..2190757 (-) Length   267 a.a.
NCBI ID   WP_048775089.1    Uniprot ID   A0AAP7M056
Organism   Streptococcus gordonii strain FDAARGOS_257     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2184954..2195757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J85_RS10890 (A6J85_10770) smc 2185098..2188631 (-) 3534 WP_082307765.1 chromosome segregation protein SMC -
  A6J85_RS10895 (A6J85_10775) rnc 2188622..2189320 (-) 699 WP_012000242.1 ribonuclease III -
  A6J85_RS10900 (A6J85_10780) - 2189563..2189919 (-) 357 WP_008809001.1 YbaN family protein -
  A6J85_RS10905 (A6J85_10785) vicX 2189954..2190757 (-) 804 WP_048775089.1 MBL fold metallo-hydrolase Regulator
  A6J85_RS10910 (A6J85_10790) micB 2190750..2192111 (-) 1362 WP_082307766.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A6J85_RS10915 (A6J85_10795) micA 2192104..2192805 (-) 702 WP_012000241.1 response regulator YycF Regulator
  A6J85_RS10920 (A6J85_10800) thrS 2193011..2194954 (-) 1944 WP_061598663.1 threonine--tRNA ligase -
  A6J85_RS11195 (A6J85_10805) - 2195046..2195417 (-) 372 WP_045773786.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29718.66 Da        Isoelectric Point: 5.9427

>NTDB_id=223209 A6J85_RS10905 WP_048775089.1 2189954..2190757(-) (vicX) [Streptococcus gordonii strain FDAARGOS_257]
MTKEGFKYSILASGSSGNCFYLETTQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=223209 A6J85_RS10905 WP_048775089.1 2189954..2190757(-) (vicX) [Streptococcus gordonii strain FDAARGOS_257]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAACCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGGAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGCCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTTGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGACTTTCAAGTTTTGGATACTTCGCCAGATACAGCTACGCCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment