Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A6J72_RS01500 Genome accession   NZ_CP020433
Coordinates   291162..291965 (-) Length   267 a.a.
NCBI ID   WP_003075634.1    Uniprot ID   A0AAD1FJP4
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 286162..296965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS01485 (A6J72_01480) smc 286183..289716 (-) 3534 WP_082311592.1 chromosome segregation protein SMC -
  A6J72_RS01490 (A6J72_01485) rnc 289707..290405 (-) 699 WP_003072976.1 ribonuclease III -
  A6J72_RS01495 (A6J72_01490) - 290794..291153 (-) 360 WP_003072977.1 YbaN family protein -
  A6J72_RS01500 (A6J72_01495) vicX 291162..291965 (-) 804 WP_003075634.1 MBL fold metallo-hydrolase Regulator
  A6J72_RS01505 (A6J72_01500) micB 291967..293319 (-) 1353 WP_003072979.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A6J72_RS01510 (A6J72_01505) micA 293312..294013 (-) 702 WP_003072980.1 response regulator YycF Regulator
  A6J72_RS01515 (A6J72_01510) - 294311..294652 (-) 342 WP_082311593.1 hypothetical protein -
  A6J72_RS01520 (A6J72_01515) - 294679..295992 (-) 1314 WP_082311594.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29893.80 Da        Isoelectric Point: 6.0341

>NTDB_id=222977 A6J72_RS01500 WP_003075634.1 291162..291965(-) (vicX) [Streptococcus intermedius strain FDAARGOS_233]
MNEKGFKYSILASGSTGNCFYLETPKRKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQDTWNAMETALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGIRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHVYDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=222977 A6J72_RS01500 WP_003075634.1 291162..291965(-) (vicX) [Streptococcus intermedius strain FDAARGOS_233]
ATGAACGAGAAAGGATTTAAGTACAGTATTTTAGCGTCAGGTTCTACTGGTAATTGTTTCTATTTAGAAACCCCGAAGAG
AAAGTTGTTGATTGATGCAGGTTTATCCGGAAAGAAAATTACTAGTTTGTTGAGCGAAATTGATCGTAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCATGAACATAAAGACCATATTCATGGTGTGGGTGTTTTAGCACGGAAATATCATTTAGAT
ATTTATGCTAATCAAGATACTTGGAATGCCATGGAAACAGCGCTTGGAAAGATTGATGTCAGCCAGAAGCATATTTTTGA
AATGGGAAAAACGAAAACATTTGGTGATATTGATATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCACCACAATTCT
ATCGATTGATGAAAGATGACAAAAGTTTTGTTTTGCTGACGGACACTGGTTATGTCAGTGATCGGATGGCAGGAATCATT
GAAAATGCAGATGGCTATTTGATTGAATCAAATCATGATATTGAAATCCTGCGCAGTGGTGCTTATCCTTGGAGTTTAAA
GCAGCGAATTTTGTCTGATCAAGGGCATTTGTCAAATGATGATGGTGCTGAAACTATGATTCGCACTCTTGGGATTCGGA
CAAAGAAAATCTATCTAGGACATCTCAGCAAGGAAAATAATACTAAAGAATTGGCTCATATTACAATGGTCAATCAATTG
GCACAAGCTGACTTGGCAGTGGAGCATGATTTTCATGTGTATGATACCTCACCAGATACGGCGACACCTTTAACCAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.273

100

0.813

Multiple sequence alignment