Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A6J68_RS01035 Genome accession   NZ_CP020432
Coordinates   196002..196775 (+) Length   257 a.a.
NCBI ID   WP_000456086.1    Uniprot ID   A0AB38VKI2
Organism   Streptococcus sp. 'group B' strain FDAARGOS_229     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 191002..201775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J68_RS01025 (A6J68_01025) rlmH 193995..194474 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A6J68_RS01030 (A6J68_01030) htrA 194675..195904 (+) 1230 WP_000728357.1 S1C family serine protease Regulator
  A6J68_RS01035 (A6J68_01035) spo0J 196002..196775 (+) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator
  A6J68_RS01040 (A6J68_01040) dnaA 196984..198345 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  A6J68_RS01045 (A6J68_01045) dnaN 198500..199636 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  A6J68_RS01050 (A6J68_01050) - 199694..200587 (+) 894 WP_000987442.1 diacylglycerol/lipid kinase family protein -
  A6J68_RS01055 (A6J68_01055) - 200597..200815 (+) 219 WP_105253154.1 DUF951 domain-containing protein -
  A6J68_RS01060 (A6J68_01060) - 200998..201114 (+) 117 WP_000369331.1 hypothetical protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29282.74 Da        Isoelectric Point: 9.8145

>NTDB_id=222922 A6J68_RS01035 WP_000456086.1 196002..196775(+) (spo0J) [Streptococcus sp. 'group B' strain FDAARGOS_229]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=222922 A6J68_RS01035 WP_000456086.1 196002..196775(+) (spo0J) [Streptococcus sp. 'group B' strain FDAARGOS_229]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCAATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment