Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   A6J31_RS01155 Genome accession   NZ_CP020431
Coordinates   14121..14564 (+) Length   147 a.a.
NCBI ID   WP_037612021.1    Uniprot ID   -
Organism   Streptococcus sp. FDAARGOS_192     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 9121..19564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS01140 (A6J31_01125) gdhA 10223..11575 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  A6J31_RS01145 (A6J31_01130) - 12234..13397 (+) 1164 WP_225791575.1 hypothetical protein -
  A6J31_RS01150 (A6J31_01135) - 13524..13934 (+) 411 WP_014633541.1 peptide deformylase -
  A6J31_RS01155 (A6J31_01140) rcrR 14121..14564 (+) 444 WP_037612021.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J31_RS01160 (A6J31_01145) rcrP 14568..16382 (+) 1815 WP_049545664.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS01165 (A6J31_01150) rcrQ 16372..18150 (+) 1779 WP_080610277.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS01170 (A6J31_01155) - 18258..18881 (+) 624 WP_080610278.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17177.68 Da        Isoelectric Point: 9.3639

>NTDB_id=222854 A6J31_RS01155 WP_037612021.1 14121..14564(+) (rcrR) [Streptococcus sp. FDAARGOS_192]
MHGKDPFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=222854 A6J31_RS01155 WP_037612021.1 14121..14564(+) (rcrR) [Streptococcus sp. FDAARGOS_192]
ATGCATGGAAAAGATCCTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCTCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAGGAAATTTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGATAAGGATAAACGCTACAAATATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.865

95.918

0.565

Multiple sequence alignment