Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J31_RS01165 Genome accession   NZ_CP020431
Coordinates   16372..18150 (+) Length   592 a.a.
NCBI ID   WP_080610277.1    Uniprot ID   A0A1V0GB47
Organism   Streptococcus sp. FDAARGOS_192     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 11372..23150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS01145 (A6J31_01130) - 12234..13397 (+) 1164 WP_225791575.1 hypothetical protein -
  A6J31_RS01150 (A6J31_01135) - 13524..13934 (+) 411 WP_014633541.1 peptide deformylase -
  A6J31_RS01155 (A6J31_01140) rcrR 14121..14564 (+) 444 WP_037612021.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J31_RS01160 (A6J31_01145) rcrP 14568..16382 (+) 1815 WP_049545664.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS01165 (A6J31_01150) rcrQ 16372..18150 (+) 1779 WP_080610277.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS01170 (A6J31_01155) - 18258..18881 (+) 624 WP_080610278.1 GNAT family N-acetyltransferase -
  A6J31_RS01175 (A6J31_01160) - 19029..19652 (+) 624 WP_013990132.1 GTP pyrophosphokinase family protein -
  A6J31_RS01180 (A6J31_01165) - 19654..20331 (+) 678 WP_048790160.1 response regulator transcription factor -
  A6J31_RS01185 (A6J31_01170) - 20345..21568 (+) 1224 WP_080610279.1 sensor histidine kinase -
  A6J31_RS01190 (A6J31_01175) pyrH 21802..22539 (+) 738 WP_002885551.1 UMP kinase -
  A6J31_RS01195 (A6J31_01180) frr 22554..23111 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65114.10 Da        Isoelectric Point: 5.0198

>NTDB_id=222856 A6J31_RS01165 WP_080610277.1 16372..18150(+) (rcrQ) [Streptococcus sp. FDAARGOS_192]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINGVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMVADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=222856 A6J31_RS01165 WP_080610277.1 16372..18150(+) (rcrQ) [Streptococcus sp. FDAARGOS_192]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGTATCACACCTACAAAAATGGGGACGATTCCAGGTATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCGATTGTGGGTTACTTACAAAGCTTTACCGTTGCGACGGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACGGTGTTCCTCTTAATTATTTTGATAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGCCAAGGGTTAGGTACCTTGATTACTTCAAGTGTTCTC
TTGGTGGCAGCCATTATTATGATGTTCTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCAGTCTTGATAGGGTT
TGTTCTAGTAGCCTTCATCATGGGCTTCTCACAACCCCTTTTCAAACGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACAGGTCAAGCAGTCGTAACGAGTTACAATGCCGCTCAAGAAAGCAGTCAGGCTTTCAAGGGG
CTTAATGATAAACTTTATAAATCGATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTCATGGTCTGTCTTGTGGGTGCCATCAAAGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTAG
CCTTCATGACCTATGTTCGCATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCAGCCACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAGTTGACAGA
TACTAAAGGTCAAGTAGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGACTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCGACAGGTGCTGGTAAAACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATCACCATTGACGGTGTGGATACGAATGACATGAAACGTGAAACTGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAATCAAGAGAATATTT
CTGACGAGCAAGTTATTGCTGCAGCTAAGGCTGTCGGTGTTCACCACTTCATTACCACACTTCCAAAGGGTTATGATACT
TATTTGGATGATTCTGTGACCTTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCGCGTGCGCTTCTTAAGGATGCCCC
TCTTCTAATCTTGGATGAAGCGACATCATCAGTTGACACCCGAACAGAAGAATTGATTCAAAAAGCTATGGACAAGCTTA
TGGAAGGTCGTACTTCCTTTGTCATTGCTCACCGCTTATCAACCATTCGAAATGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGTAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(371-516)

ABC transporter transmembrane region (ABC_membrane)

(25-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0GB47

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.919

100

0.689

Multiple sequence alignment