Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C2H97_RS08570 Genome accession   NZ_CP026038
Coordinates   1642960..1643754 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis PY79 strain PK1_3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1637960..1648754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H97_RS08545 (C2H97_08575) rocD 1638408..1639613 (-) 1206 WP_120027672.1 ornithine aminotransferase -
  C2H97_RS08550 (C2H97_08580) rocR 1639854..1641239 (+) 1386 WP_120027673.1 arginine utilization regulatory protein RocR -
  C2H97_RS08555 (C2H97_08585) - 1641221..1641409 (-) 189 Protein_1684 ATP-binding protein -
  C2H97_RS08560 - 1641526..1641656 (-) 131 Protein_1685 hypothetical protein -
  C2H97_RS08565 (C2H97_08595) htrA 1641676..1642878 (-) 1203 WP_120027674.1 serine protease HtrC Regulator
  C2H97_RS08570 (C2H97_08600) vicX 1642960..1643754 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C2H97_RS08575 (C2H97_08605) walI 1643776..1644618 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  C2H97_RS08580 (C2H97_08610) walH 1644605..1645972 (-) 1368 WP_046664054.1 WalRK two-component regulatory system regulator WalH -
  C2H97_RS08585 (C2H97_08615) walK 1645962..1647797 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  C2H97_RS08590 (C2H97_08620) walR 1647805..1648512 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=222798 C2H97_RS08570 WP_003226939.1 1642960..1643754(-) (vicX) [Bacillus subtilis PY79 strain PK1_3]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=222798 C2H97_RS08570 WP_003226939.1 1642960..1643754(-) (vicX) [Bacillus subtilis PY79 strain PK1_3]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATTGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTGCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACGTTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment