Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6J51_RS05605 Genome accession   NZ_CP020423
Coordinates   947451..948146 (+) Length   231 a.a.
NCBI ID   WP_002238667.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_212     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 942451..953146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J51_RS05585 (A6J51_05380) - 943069..943467 (+) 399 WP_002216361.1 DoxX family protein -
  A6J51_RS05590 (A6J51_05385) - 943516..944121 (+) 606 WP_002218691.1 nitroreductase family protein -
  A6J51_RS05595 (A6J51_05390) - 944307..946418 (+) 2112 WP_080611094.1 TonB-dependent siderophore receptor -
  A6J51_RS05600 (A6J51_05395) - 946621..947280 (+) 660 WP_002218694.1 NYN domain-containing protein -
  A6J51_RS05605 (A6J51_05400) dsbA2 947451..948146 (+) 696 WP_002238667.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J51_RS05615 (A6J51_05405) ffh 948479..949849 (-) 1371 WP_080611096.1 signal recognition particle protein -
  A6J51_RS05620 (A6J51_05410) - 950069..950875 (+) 807 WP_015815901.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25446.97 Da        Isoelectric Point: 5.3625

>NTDB_id=222764 A6J51_RS05605 WP_002238667.1 947451..948146(+) (dsbA2) [Neisseria meningitidis strain FDAARGOS_212]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSNTSAPATPAALTEGINYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222764 A6J51_RS05605 WP_002238667.1 947451..948146(+) (dsbA2) [Neisseria meningitidis strain FDAARGOS_212]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAACACATCCGCTCCGGCAACCCCTGCCGCATTGACCGAAGGTATCAATTACACCGTAT
TGTCCAATCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.97

100

0.97

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment