Detailed information NTG0222753

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H97_RS00810
• Genome accession: NZ_CP026038
• Coordinates: 137288..138415 (+)
• Length: 375 a.a.
• NCBI ID: WP_249848112.1
• Uniprot ID: -
• Organism: Bacillus subtilis PY79 strain PK1_3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 132288..143415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H97_RS00790	-	133647..133981 (-)	335	Protein_157	aspartate phosphatase	-
C2H97_RS00795 (C2H97_00800)	-	134070..135221 (-)	1152	WP_249848118.1	DNA-processing protein DprA	-
C2H97_RS00800 (C2H97_00805)	-	135265..136446 (-)	1182	WP_249848116.1	hypothetical protein	-
C2H97_RS00805 (C2H97_00810)	-	136458..136967 (-)	510	WP_249848114.1	HAD family hydrolase	-
C2H97_RS00810 (C2H97_00815)	rapC	137288..138415 (+)	1128	WP_249848112.1	response regulator aspartate phosphatase RapE	Regulator
C2H97_RS00815 (C2H97_00820)	phrE	138405..138539 (+)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
C2H97_RS00820 (C2H97_00825)	-	138649..138808 (+)	160	Protein_163	hypothetical protein	-
C2H97_RS00825 (C2H97_00830)	yqcG	139178..140773 (+)	1596	WP_249848109.1	LXG family T7SS effector endonuclease toxin YqcG	-
C2H97_RS00830 (C2H97_00835)	yqcF	140788..141366 (+)	579	WP_249848107.1	type VII secretion system immunity protein YqcF	-
C2H97_RS00835 (C2H97_00840)	-	141479..141871 (+)	393	WP_087961312.1	immunity 50 family protein	-
C2H97_RS00840 (C2H97_00845)	-	141881..142321 (+)	441	Protein_167	SMI1/KNR4 family protein	-
C2H97_RS00845 (C2H97_00850)	-	142514..143059 (-)	546	WP_087961310.1	SMI1/KNR4 family protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44587.41 Da
• Isoelectric Point: 7.5503

>NTDB_id=222753 C2H97_RS00810 WP_249848112.1 137288..138415(+) (rapC) [Bacillus subtilis PY79 strain PK1_3]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNCFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVHYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222753 C2H97_RS00810 WP_249848112.1 137288..138415(+) (rapC) [Bacillus subtilis PY79 strain PK1_3]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAGATCATGTTGGAATACACACTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTG
AAGAAAATCGAAGGACATAAGAAGAAGCTGGACAATATGCGAGCGTATTATTATAACTGCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAGATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
TGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCATTACAGAAAAATTAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGCGCCGTAGACTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (184-250)

• Tetratricopeptide repeat (TPR_8) (259-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.633	100	0.411
rapF	Bacillus subtilis subsp. subtilis str. 168	37.931	100	0.381