Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6J50_RS03595 Genome accession   NZ_CP020422
Coordinates   602855..603550 (-) Length   231 a.a.
NCBI ID   WP_080541858.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_211     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 597855..608550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J50_RS03585 (A6J50_03520) - 600125..600931 (-) 807 WP_013449598.1 inner membrane protein YpjD -
  A6J50_RS03590 (A6J50_03525) ffh 601151..602521 (+) 1371 WP_080541857.1 signal recognition particle protein -
  A6J50_RS03595 (A6J50_03530) dsbA2 602855..603550 (-) 696 WP_080541858.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J50_RS03600 (A6J50_03535) - 603665..605776 (-) 2112 WP_080541859.1 TonB-dependent siderophore receptor -
  A6J50_RS03605 (A6J50_03545) - 606064..606955 (-) 892 Protein_592 IS5 family transposase -
  A6J50_RS03610 (A6J50_03550) - 607079..607684 (-) 606 WP_080541860.1 nitroreductase family protein -
  A6J50_RS03615 (A6J50_03555) - 607733..608131 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25447.95 Da        Isoelectric Point: 5.1502

>NTDB_id=222707 A6J50_RS03595 WP_080541858.1 602855..603550(-) (dsbA2) [Neisseria meningitidis strain FDAARGOS_211]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADIDTLKKWLSEQTAF
DGKKVLAAFEAPESQARSAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222707 A6J50_RS03595 WP_080541858.1 602855..603550(-) (dsbA2) [Neisseria meningitidis strain FDAARGOS_211]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCTGATATCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTTCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCTGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment