Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   A6J49_RS11805 Genome accession   NZ_CP020421
Coordinates   2011813..2012511 (-) Length   232 a.a.
NCBI ID   WP_002224844.1    Uniprot ID   Q9K189
Organism   Neisseria meningitidis strain FDAARGOS_210     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2006813..2017511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J49_RS11790 (A6J49_11375) - 2007126..2008169 (-) 1044 WP_050887586.1 peptidylprolyl isomerase -
  A6J49_RS11795 (A6J49_11380) - 2008274..2010682 (-) 2409 WP_002243965.1 LPS-assembly protein LptD -
  A6J49_RS11800 (A6J49_11385) amgK 2010752..2011756 (+) 1005 WP_002224845.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  A6J49_RS11805 (A6J49_11390) dsbA1 2011813..2012511 (-) 699 WP_002224844.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J49_RS11815 (A6J49_11400) murJ 2012729..2014267 (+) 1539 WP_002224843.1 murein biosynthesis integral membrane protein MurJ -
  A6J49_RS14925 - 2014271..2014402 (+) 132 WP_255304562.1 hypothetical protein -
  A6J49_RS11820 (A6J49_11405) - 2014399..2015355 (+) 957 WP_105165331.1 YheT family hydrolase -
  A6J49_RS11825 (A6J49_11410) trpC 2015406..2016188 (+) 783 WP_002221930.1 indole-3-glycerol phosphate synthase TrpC -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25249.83 Da        Isoelectric Point: 5.6277

>NTDB_id=222685 A6J49_RS11805 WP_002224844.1 2011813..2012511(-) (dsbA1) [Neisseria meningitidis strain FDAARGOS_210]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=222685 A6J49_RS11805 WP_002224844.1 2011813..2012511(-) (dsbA1) [Neisseria meningitidis strain FDAARGOS_210]
ATGAAATCCAGACACCTTGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACCGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAAATCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCCTACGAGTCCCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGTAAATATAAAGTTGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3A3T
  PDB 3DVW
  PDB 3HZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

100

100

1
  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621

Multiple sequence alignment