Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C2H95_RS12930 Genome accession   NZ_CP026037
Coordinates   2539800..2540417 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain PK5_17     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2534800..2545417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS12900 (C2H95_12835) yndJ 2535126..2536766 (+) 1641 WP_103804152.1 YndJ family protein -
  C2H95_RS12905 (C2H95_12840) - 2536844..2537158 (+) 315 WP_103804150.1 hypothetical protein -
  C2H95_RS12910 (C2H95_12845) pghL 2537383..2538141 (+) 759 WP_103804148.1 gamma-polyglutamate hydrolase PghL -
  C2H95_RS12915 (C2H95_12850) - 2538168..2538617 (-) 450 WP_003245454.1 YndM family protein -
  C2H95_RS12920 (C2H95_12855) fosB 2538826..2539260 (+) 435 WP_103804146.1 metallothiol transferase FosB -
  C2H95_RS12925 - 2539169..2539446 (+) 278 Protein_2495 hypothetical protein -
  C2H95_RS12930 (C2H95_12865) dinR/lexA 2539800..2540417 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C2H95_RS12935 (C2H95_12870) yneA 2540567..2540884 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  C2H95_RS12940 (C2H95_12875) dinL 2540903..2541556 (+) 654 WP_003231596.1 recombinase family protein -
  C2H95_RS12945 (C2H95_12880) ynzC 2541620..2541853 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  C2H95_RS12950 (C2H95_12885) recP/tkt 2542022..2544025 (+) 2004 WP_003231593.1 transketolase Machinery gene
  C2H95_RS12955 (C2H95_12890) sirA 2544178..2544624 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C2H95_RS12960 (C2H95_12895) yneF 2544710..2544928 (+) 219 WP_003221221.1 YneF family protein -
  C2H95_RS12965 (C2H95_12900) ynzD 2545002..2545175 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=222684 C2H95_RS12930 WP_003238209.1 2539800..2540417(-) (dinR/lexA) [Bacillus subtilis strain PK5_17]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=222684 C2H95_RS12930 WP_003238209.1 2539800..2540417(-) (dinR/lexA) [Bacillus subtilis strain PK5_17]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTCGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment