Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | A6J46_RS06255 | Genome accession | NZ_CP020419 |
| Coordinates | 1055867..1056262 (+) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_207 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1050867..1061262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J46_RS13990 (A6J46_06285) | - | 1055646..1055762 (+) | 117 | Protein_1065 | competence protein ComE | - |
| A6J46_RS06255 (A6J46_06290) | comE | 1055867..1056262 (+) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| A6J46_RS06270 (A6J46_06305) | - | 1056613..1056936 (-) | 324 | Protein_1067 | hypothetical protein | - |
| A6J46_RS06275 (A6J46_06310) | - | 1057210..1057863 (-) | 654 | WP_105211389.1 | IS1595-like element IS1016 family transposase | - |
| A6J46_RS13645 | - | 1058003..1058488 (-) | 486 | WP_225577457.1 | hypothetical protein | - |
| A6J46_RS13650 | - | 1058524..1058721 (+) | 198 | WP_162098126.1 | hypothetical protein | - |
| A6J46_RS06290 (A6J46_06325) | prmB | 1058820..1059719 (+) | 900 | WP_014580280.1 | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | - |
| A6J46_RS06295 (A6J46_06330) | - | 1059857..1060594 (+) | 738 | WP_003691604.1 | toxin-antitoxin system YwqK family antitoxin | - |
| A6J46_RS06300 (A6J46_06335) | - | 1060719..1060991 (+) | 273 | WP_003691603.1 | ACT domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=222574 A6J46_RS06255 WP_003703428.1 1055867..1056262(+) (comE) [Neisseria gonorrhoeae strain FDAARGOS_207]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=222574 A6J46_RS06255 WP_003703428.1 1055867..1056262(+) (comE) [Neisseria gonorrhoeae strain FDAARGOS_207]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |