Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | A6J44_RS01285 | Genome accession | NZ_CP020418 |
| Coordinates | 150469..150864 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_205 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 145469..155864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J44_RS01235 (A6J44_01230) | - | 145772..146017 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| A6J44_RS01245 (A6J44_01240) | - | 146129..146557 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| A6J44_RS01250 (A6J44_01245) | - | 146569..147045 (+) | 477 | WP_047920274.1 | CYTH domain-containing protein | - |
| A6J44_RS01255 (A6J44_01250) | - | 147075..147563 (-) | 489 | WP_025455834.1 | dihydrofolate reductase | - |
| A6J44_RS01260 (A6J44_01255) | aroG | 147631..148686 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| A6J44_RS14135 | - | 148848..149075 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| A6J44_RS14895 (A6J44_01265) | - | 149303..149599 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| A6J44_RS14900 (A6J44_01270) | - | 149596..149835 (+) | 240 | WP_012503951.1 | membrane protein | - |
| A6J44_RS01285 (A6J44_01280) | comE | 150469..150864 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| A6J44_RS14510 (A6J44_01285) | - | 150969..151085 (-) | 117 | Protein_183 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=222514 A6J44_RS01285 WP_003703428.1 150469..150864(-) (comE) [Neisseria gonorrhoeae strain FDAARGOS_205]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=222514 A6J44_RS01285 WP_003703428.1 150469..150864(-) (comE) [Neisseria gonorrhoeae strain FDAARGOS_205]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |