Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   A6J43_RS00805 Genome accession   NZ_CP020415
Coordinates   133673..134377 (+) Length   234 a.a.
NCBI ID   WP_010951331.1    Uniprot ID   Q5F649
Organism   Neisseria gonorrhoeae strain FDAARGOS_204     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 128673..139377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J43_RS00790 (A6J43_00765) trpC 129775..130557 (-) 783 WP_003689906.1 indole-3-glycerol phosphate synthase TrpC -
  A6J43_RS00795 (A6J43_00770) - 130608..131564 (-) 957 WP_003694227.1 YheT family hydrolase -
  A6J43_RS00800 (A6J43_00775) murJ 131697..133235 (-) 1539 WP_003689904.1 murein biosynthesis integral membrane protein MurJ -
  A6J43_RS00805 (A6J43_00780) dsbA1 133673..134377 (+) 705 WP_010951331.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J43_RS00810 (A6J43_00785) amgK 134434..135438 (-) 1005 WP_003689901.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  A6J43_RS00815 (A6J43_00790) - 135508..137913 (+) 2406 WP_003698952.1 LPS-assembly protein LptD -
  A6J43_RS00820 (A6J43_00795) - 138015..139016 (+) 1002 WP_003691902.1 peptidylprolyl isomerase -

Sequence


Protein


Download         Length: 234 a.a.        Molecular weight: 25420.13 Da        Isoelectric Point: 5.6758

>NTDB_id=222463 A6J43_RS00805 WP_010951331.1 133673..134377(+) (dsbA1) [Neisseria gonorrhoeae strain FDAARGOS_204]
MKSRHLALALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHC
ARLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQ
TAFDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 705 bp        

>NTDB_id=222463 A6J43_RS00805 WP_010951331.1 133673..134377(+) (dsbA1) [Neisseria gonorrhoeae strain FDAARGOS_204]
ATGAAATCCAGACACCTCGCCCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAAC
CAGCGTCCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGACTGGTCGAAGGGCAAAACTACACCG
TCCTTGCCAACCCGATTCCCCAACAGCAGGCAGGCAAGGTTGAAGTGCTTGAGTTTTTCGGCTATTTTTGTCCGCACTGC
GCCCGCCTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTG
GCAGAAAGAAATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACA
GCCATATTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAA
ACCGCCTTTGACGGCAAAAAAGTCCTTGCCGCCTACGAATCCCCCGAAAGTCAGGCGCGCGCCGGCAAAATGCAGGAGCT
GACCGAAACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGT
CCGGTATGAACACCATCGACCTTTTGGCGGACAAAGTACGTGAAGAACAAAAAGCCGCGCAGTAG

Domains


Predicted by InterproScan.

(65-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5F649

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

97.009

100

0.97

  dsbA2 Neisseria meningitidis MC58

76.19

80.769

0.615


Multiple sequence alignment