Detailed information NTG0222440

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: A6J40_RS06990
• Genome accession: NZ_CP020412
• Coordinates: 1578054..1579118 (-)
• Length: 354 a.a.
• NCBI ID: WP_003632474.1
• Uniprot ID: -
• Organism: Legionella longbeachae strain FDAARGOS_201
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1573054..1584118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J40_RS06965 (A6J40_06940)	aroK	1573410..1573937 (-)	528	WP_003632469.1	shikimate kinase AroK	-
A6J40_RS06970 (A6J40_06945)	pilQ	1574273..1576378 (-)	2106	WP_012978911.1	type IV pilus secretin PilQ	Machinery gene
A6J40_RS06975 (A6J40_06950)	pilP	1576387..1576893 (-)	507	WP_003632471.1	pilus assembly protein PilP	Machinery gene
A6J40_RS06980 (A6J40_06955)	pilO	1576890..1577489 (-)	600	WP_012978910.1	type 4a pilus biogenesis protein PilO	Machinery gene
A6J40_RS06985 (A6J40_06960)	pilN	1577486..1578049 (-)	564	WP_003632473.1	PilN domain-containing protein	Machinery gene
A6J40_RS06990 (A6J40_06965)	pilM	1578054..1579118 (-)	1065	WP_003632474.1	type IV pilus assembly protein PilM	Machinery gene
A6J40_RS06995 (A6J40_06970)	-	1579355..1580785 (+)	1431	WP_080619813.1	M protein	-
A6J40_RS07000 (A6J40_06975)	-	1580996..1583362 (+)	2367	WP_012978909.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 39125.36 Da
• Isoelectric Point: 5.1674

>NTDB_id=222440 A6J40_RS06990 WP_003632474.1 1578054..1579118(-) (pilM) [Legionella longbeachae strain FDAARGOS_201]
MLKLLQPQHRSILGIDITSTAVKILEISGKNNELVIENYGREILPPNAMDGNVIKDLDAVSQCVKKIVDRLHTPCKQAAL
AVPDAAIISKVVQINEGLNEEEMEELIATEADKYIPYPIEEINLDFEVLGPHQKNPHLLDVLIVASRAENVNQRVGIAAA
AGLDTVVVDVESYAVERAAQRIALDLPGLGKDKTIAIIDIGACYTHLFVLHRMKLVYSREEKFGDKQLIESIAERYKMTL
EEAALARDKKQLPSNYETEVLEPFKENILLQIKRTLQFFYSTNQDGDVDHILLAGGLAKLPGLVALVKDRLGKTTIIANP
LSYMTPSKKIHLDAINNDAPALMVACGLALRNIE

Nucleotide

• Length: 1065 bp

>NTDB_id=222440 A6J40_RS06990 WP_003632474.1 1578054..1579118(-) (pilM) [Legionella longbeachae strain FDAARGOS_201]
ATGCTCAAATTACTACAACCTCAGCATCGTTCAATTCTCGGAATAGACATTACATCCACGGCAGTCAAAATATTAGAAAT
CTCAGGTAAGAATAATGAGCTTGTTATAGAGAATTACGGACGAGAAATATTACCACCCAATGCAATGGATGGTAATGTTA
TTAAGGATCTTGATGCAGTTTCCCAATGTGTTAAAAAAATAGTTGACCGATTGCATACCCCATGTAAGCAAGCTGCTTTG
GCTGTGCCAGATGCTGCGATAATCAGTAAAGTAGTGCAAATTAATGAAGGCTTAAATGAAGAGGAGATGGAGGAGCTTAT
CGCTACTGAGGCTGATAAATATATTCCTTATCCAATTGAGGAAATTAATCTTGATTTCGAAGTTTTAGGTCCGCATCAGA
AAAATCCGCATCTACTCGATGTACTTATCGTTGCTTCGCGAGCGGAGAATGTGAACCAACGTGTTGGAATAGCGGCGGCT
GCGGGTTTAGATACAGTGGTTGTAGATGTTGAGTCTTACGCTGTGGAGCGAGCAGCACAACGTATTGCTTTAGATTTACC
AGGACTTGGTAAAGATAAAACAATTGCGATTATTGATATTGGAGCATGTTATACCCATTTATTTGTATTGCATAGAATGA
AATTAGTTTATTCCCGAGAAGAAAAATTTGGTGATAAGCAATTAATTGAATCAATTGCTGAACGCTATAAAATGACCTTG
GAAGAGGCAGCTCTTGCCAGGGATAAAAAACAATTACCTTCTAACTATGAAACGGAAGTTTTAGAACCATTTAAAGAAAA
TATCTTGTTACAGATTAAAAGAACCTTGCAGTTTTTTTATTCTACAAACCAAGATGGAGATGTGGATCATATTTTATTAG
CAGGGGGATTAGCCAAATTACCAGGCTTAGTTGCTTTAGTTAAAGACCGTTTAGGAAAAACAACTATTATTGCTAATCCA
CTTTCATATATGACCCCAAGTAAAAAAATCCATTTGGATGCAATAAATAATGATGCACCCGCACTTATGGTAGCTTGTGG
TTTAGCATTAAGAAATATAGAGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Legionella pneumophila strain ERS1305867	66.667	100	0.667
pilM	Acinetobacter baumannii D1279779	42.655	100	0.427
comM	Acinetobacter nosocomialis M2	42.655	100	0.427
comM	Acinetobacter baylyi ADP1	40.678	100	0.407