Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6J40_RS06985 | Genome accession | NZ_CP020412 |
| Coordinates | 1577486..1578049 (-) | Length | 187 a.a. |
| NCBI ID | WP_003632473.1 | Uniprot ID | D3HQQ0 |
| Organism | Legionella longbeachae strain FDAARGOS_201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1572486..1583049
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J40_RS06965 (A6J40_06940) | aroK | 1573410..1573937 (-) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
| A6J40_RS06970 (A6J40_06945) | pilQ | 1574273..1576378 (-) | 2106 | WP_012978911.1 | type IV pilus secretin PilQ | Machinery gene |
| A6J40_RS06975 (A6J40_06950) | pilP | 1576387..1576893 (-) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| A6J40_RS06980 (A6J40_06955) | pilO | 1576890..1577489 (-) | 600 | WP_012978910.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A6J40_RS06985 (A6J40_06960) | pilN | 1577486..1578049 (-) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| A6J40_RS06990 (A6J40_06965) | pilM | 1578054..1579118 (-) | 1065 | WP_003632474.1 | type IV pilus assembly protein PilM | Machinery gene |
| A6J40_RS06995 (A6J40_06970) | - | 1579355..1580785 (+) | 1431 | WP_080619813.1 | M protein | - |
Sequence
Protein
Download Length: 187 a.a. Molecular weight: 21920.72 Da Isoelectric Point: 7.3178
>NTDB_id=222439 A6J40_RS06985 WP_003632473.1 1577486..1578049(-) (pilN) [Legionella longbeachae strain FDAARGOS_201]
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
Nucleotide
Download Length: 564 bp
>NTDB_id=222439 A6J40_RS06985 WP_003632473.1 1577486..1578049(-) (pilN) [Legionella longbeachae strain FDAARGOS_201]
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
62.295 |
97.861 |
0.61 |