Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C2H96_RS11200 Genome accession   NZ_CP026035
Coordinates   2205194..2206021 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain PK5_68     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2200194..2211021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS11175 (C2H96_11110) abrB 2202540..2202830 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  C2H96_RS11180 (C2H96_11115) rsmI 2202879..2203757 (-) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C2H96_RS11185 (C2H96_11120) yazA 2203732..2204031 (-) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  C2H96_RS11190 (C2H96_11125) trmNF 2204018..2204761 (-) 744 WP_021479732.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C2H96_RS11195 (C2H96_11130) yabA 2204820..2205179 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  C2H96_RS11200 (C2H96_11135) yaaT 2205194..2206021 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  C2H96_RS11205 (C2H96_11140) holB 2206024..2207013 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  C2H96_RS11210 (C2H96_11145) yaaR 2207025..2207465 (-) 441 WP_009966249.1 YaaR family protein -
  C2H96_RS11215 (C2H96_11150) darA 2207478..2207807 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C2H96_RS11220 (C2H96_11155) tmk 2207881..2208519 (-) 639 WP_069322312.1 dTMP kinase -
  C2H96_RS11225 (C2H96_11160) yaaO 2208516..2209958 (-) 1443 WP_249847843.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=222367 C2H96_RS11200 WP_003226767.1 2205194..2206021(-) (yaaT) [Bacillus subtilis strain PK5_68]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=222367 C2H96_RS11200 WP_003226767.1 2205194..2206021(-) (yaaT) [Bacillus subtilis strain PK5_68]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTTGCTGACGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATAACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996