Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C2H96_RS01290 Genome accession   NZ_CP026035
Coordinates   260485..261102 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain PK5_68     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 255485..266102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS01255 (C2H96_01220) ynzD 255727..255900 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  C2H96_RS01260 (C2H96_01225) yneF 255974..256192 (-) 219 WP_003221221.1 YneF family protein -
  C2H96_RS01265 (C2H96_01230) sirA 256278..256724 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C2H96_RS01270 (C2H96_01235) recP/tkt 256877..258880 (-) 2004 WP_003231593.1 transketolase Machinery gene
  C2H96_RS01275 (C2H96_01240) ynzC 259049..259282 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  C2H96_RS01280 (C2H96_01245) dinL 259346..259999 (-) 654 WP_003231596.1 recombinase family protein -
  C2H96_RS01285 (C2H96_01250) yneA 260018..260335 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  C2H96_RS01290 (C2H96_01255) dinR/lexA 260485..261102 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C2H96_RS01295 - 261455..261732 (-) 278 Protein_257 hypothetical protein -
  C2H96_RS01300 (C2H96_01265) fosM 261641..262075 (-) 435 WP_070549066.1 FosM family fosfomycin resistance protein -
  C2H96_RS01305 (C2H96_01270) - 262286..262735 (+) 450 WP_003245454.1 YndM family protein -
  C2H96_RS01310 (C2H96_01275) pghL 262762..263520 (-) 759 WP_021479204.1 gamma-polyglutamate hydrolase PghL -
  C2H96_RS01315 (C2H96_01280) - 263744..264058 (-) 315 WP_172849938.1 hypothetical protein -
  C2H96_RS01320 (C2H96_01285) yndJ 264148..265788 (-) 1641 WP_070549062.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=222291 C2H96_RS01290 WP_003238209.1 260485..261102(+) (dinR/lexA) [Bacillus subtilis strain PK5_68]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=222291 C2H96_RS01290 WP_003238209.1 260485..261102(+) (dinR/lexA) [Bacillus subtilis strain PK5_68]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment